FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\nAChRα4-RF
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General Information
Symbol
Dmel\nAChRα4-RF
Species
D. melanogaster
Annotation Symbol
CG12414-RF
FlyBase ID
FBtr0308332
Feature type
mRNA
Associated gene
Dmel\nAChRα4
Evidence Rank
Length (nt)
2354
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 51 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TATCTAGTTTCAACCGACAATTCAATGGTTTGATAATCAATTCGCGACTCCATGACAAAATTCTATATTTAATGATGTAA
CAATTACACGTTTCTGTGTATAAATAATTAAATTGTATGTTGCTTATCCTGAGTATTGTGCAATGCGGACGGTACATTTA
ATAATTCGCTTACGTGATAAATAAGTGGCATGAAAAATATTTGCAAGCAATAATACATTGCCATTTTAGGCTTAGTCCGC
TACCTAACTGAAAGTGTTATTGACCAAAATAAGAATAGGAATACATAGTTCTAAAAAGGCACTTCGTATATTAAAAATTA
TACATTCTTCACAAACTATTGGTCGCTAAAGGACATCCTAAATAAGACGATAAACTATACGTATTTTAAGCAAGGAATTA
AAGTTGGAGACCACAGCACAATGAAGTTTTTATTTGAAATATTAAGACTTTTTATTAAAAAGCCGTCTTCGGGCGGAACC
CTCAGAGCTTGGATACTTTCCGCACTCATGGTACATGGAGCAGTGGCTGGAAACCCGGACGCAAAACGGTTATATGATGA
TCTTTTAAGCAACTACAACAAATTAGTTAGACCTGTTGTTAATACGACAGATGTTCTAAAAGTTTGCATTAAATTAAAAC
TTTCACAGCTTATAGATGTGAACCTAAAAAATCAAATTATGACCACCAATCTTTGGGTCGAGCAGTCGTGGTATGATTAC
AAACTTCGTTGGGAACCTAAAGAATATGGTGGAGTTCATATGCTGCATGTTCCTTCAGATCATATATGGAGACCGGATAT
TGTCCTTTATAATAAATCCGCCATGTTTGTTTTTTGGCTGACCCTGCTTCTCCATGGATCACTTTGCTGTAAACTATCGT
GGACTTTAAGTCATTTGTGAAAACCACTACACCAAAACTTCTTGCATCGCAGCAGTCCAAAAGTTGATCTGAGGCACATG
GATGAACAACAGGGCAGCAACGTTGTTGCTGTGGGTGTGGACCTATCTGAATTTTATATGTCTGTGGAATGGGACATTCT
CGAAGTTCCAGCTGTTAGGAATGAAAAGTTTTATACTTGTTGCGACGAACCATACTTGGACATCACATTTAATATAACAA
TGAGAAGGAAGACGCTTTTTTATACTGTTAATATAATAATACCGTGCATGGGAATATCATTTTTAACTGTATTAACATTT
TACCTTCCATCGGATAGTGGAGAAAAGGTCACACTATCTATCTCCATTCTTATTAGTCTTCACGTGTTCTTTCTTTTGGT
GGTTGAAATTATACCACCAACGTCATTGGTTGTTCCTTTGCTGGGAAAATACCTAATATTTGCCATGATACTTGTGTCTA
TCAGTATCTGCGTGACGGTTGTTGTTTTGAACGTTCATTTTCGTTCACCTCAAACTCATAAAATGGCACCCTGGGTTAAG
CGCGTCTTTATTGACTTTTTGCCAGCGTTTTTATTCATTAAAAGGCCGACGTACAACTTTGAAACGAGTAAATTACTTTT
AAAGGACACACATGCTTGCTTTTATCCTTATTATTCTGCAACAAATATCGATCGACTCGTGTCTTCAGGATACAACAATA
GTCTGCCAAAAGAAGATTTATCGCAAAGCATTACGGCGAATGGACCATTTGGAGGAAGTTGTCAGGTTCATGGCCCAGTG
CCGCCACTCACCCATTGTAGTTCAGACGAAATAGCCGCCGTCCCCGATATGGATATCGGACCCTTAGGGATGAAAAGTCC
CATTTTAAATAATCCAGCATTTTCCCACTCTAAATGCCTTCCTAAAATTCACAAAAGCTGTTTTTGTGTGCGCTTTATTG
CAGAGCATACAAAAATGCAAGAGGACTCAACTAAAGTTAAAGAGGATTGGAAATACGTTGCTATGGTATTGGATAGACTT
TTTTTGTGGATATTCACGTTGGCAGTTGTGGTTGGGACCGCCGGAATAATTTTACAAGCTCCTACGTTATATGACGACCG
CATCCCGATTATTGAGCAAAAGGATTTGGACTTTTCAGGAACATCAGCCGGTCGCTGTAGACCTCCACAATAACATTATT
ATATTAAAAGAATTTAATTTTAAACTGAGGTGTATCAGATTATTATTACAAAATGAACTTTAACTAATATTTTCTGCAGG
AAAAAATGTTAAAAATTACATATGTGTGTATTGAAGGCTTTAAGTAACAAATTACCTATTTTTTATTTTTGACCACATTT
AGATATTCCAAAGTAATTTGGTATTCTTAGGCACTTCAAACCACGACATTTTTTTTATTTATCCTTGTCAACGAACTTAA
AGAATAAAATTTTAACATTTTAATCTTAAACCAG
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        nAChRα4-RC
        FBtr0300118
        5645
        nAChRα4-RD
        FBtr0308330
        5464
        nAChRα4-RE
        FBtr0308331
        1509
        nAChRα4-RG
        FBtr0332872
        2281
        nAChRα4-RH
        FBtr0346707
        5645
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        nAChRα4-PF
        FBpp0300651
        371
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        nAChRα4-PC
        FBpp0289395
        539
        nAChRα4-PD
        FBpp0300649
        371
        nAChRα4-PE
        FBpp0300650
        384
        nAChRα4-PG
        FBpp0305094
        499
        nAChRα4-PH
        FBpp0312320
        539
        Comments

        Based on RNA-seq data that predicts premature stop codon and/or downstream start; may or may not produce functional polypeptide.

        Unconventional splice site postulated (GA-AG); supported by multiple cDNAs, RNA-seq data, and conservation across close Drosophila species.

        Transcript terminates at site supported by polyadenylated cDNA.

        transcript_exception: non_canonical_splice_site

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        nAChRα4-RF
        nAcRα-80B-RF
        Secondary FlyBase IDs
          References (0)