FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Transcript: Dmel\nAChRα4-RH
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General Information
Symbol
Dmel\nAChRα4-RH
Species
D. melanogaster
Annotation Symbol
CG12414-RH
FlyBase ID
FBtr0346707
Feature type
mRNA
Associated gene
Dmel\nAChRα4
Evidence Rank
Length (nt)
5645
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 51 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        Contained within the annotated transcript, internally consistent
        End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        TATCTAGTTTCAACCGACAATTCAATGGTTTGATAATCAATTCGCGACTCCATGACAAAATTCTATATTTAATGATGTAA
CAATTACACGTTTCTGTGTATAAATAATTAAATTGTATGTTGCTTATCCTGAGTATTGTGCAATGCGGACGGTACATTTA
ATAATTCGCTTACGTGATAAATAAGTGGCATGAAAAATATTTGCAAGCAATAATACATTGCCATTTTAGGCTTAGTCCGC
TACCTAACTGAAAGTGTTATTGACCAAAATAAGAATAGGAATACATAGTTCTAAAAAGGCACTTCGTATATTAAAAATTA
TACATTCTTCACAAACTATTGGTCGCTAAAGGACATCCTAAATAAGACGATAAACTATACGTATTTTAAGCAAGGAATTA
AAGTTGGAGACCACAGCACAATGAAGTTTTTATTTGAAATATTAAGACTTTTTATTAAAAAGCCGTCTTCGGGCGGAACC
CTCAGAGCTTGGATACTTTCCGCACTCATGGTACATGGAGCAGTGGCTGGAAACCCGGACGCAAAACGGTTATATGATGA
TCTTTTAAGCAACTACAACAAATTAGTTAGACCTGTTGTTAATACGACAGATGTTCTAAAAGTTTGCATTAAATTAAAAC
TTTCACAGCTTATAGATGTGAACCTAAAAAATCAAATTATGACCACCAATCTTTGGGTCGAGCAGTCGTGGTATGATTAC
AAACTTCGTTGGGAACCTAAAGAATATGGTGGAGTTCATATGCTGCATGTTCCTTCAGATCATATATGGAGACCGGATAT
TGTCCTTTATAATAATGCTGATGGTCATTATGAAGTGACACTTATGACAAAAGCAATAGTCTATAATAATGGATTGGTCA
TATGGCAACCTCCTGCCGTCTATAAATCCTCTTGTTCAATCGATGTTGAATATTTTCCGTATGACGTACAAACCTGCATC
TTAAAATTAGGAAGTTGGACCTATGATGGTTTTAAGGTTGATCTGAGGCACATGGATGAACAACAGGGCAGCAACGTTGT
TGCTGTGGGTGTGGACCTATCTGAATTTTATATGTCTGTGGAATGGGACATTCTCGAAGTTCCAGCTGTTAGGAATGAAA
AGTTTTATACTTGTTGCGACGAACCATACTTGGACATCACATTTAATATAACAATGAGAAGGAAGACGCTTTTTTATACT
GTTAATATAATAATACCGTGCATGGGAATATCATTTTTAACTGTATTAACATTTTACCTTCCATCGGATAGTGGAGAAAA
GGTCACACTATCTATCTCCATTCTTATTAGTCTTCACGTGTTCTTTCTTTTGGTGGTTGAAATTATACCACCAACGTCAT
TGGTTGTTCCTTTGCTGGGAAAATACCTAATATTTGCCATGATACTTGTGTCTATCAGTATCTGCGTGACGGTTGTTGTT
TTGAACGTTCATTTTCGTTCACCTCAAACTCATAAAATGGCACCCTGGGTTAAGCGCGTCTTTATTGACTTTTTGCCAGC
GTTTTTATTCATTAAAAGGCCGACGTACAACTTTGAAACGAGTAAATTACTTTTAAAGGACACACATGCTTGCTTTTATC
CTTATTATTCTGCAACAAATATCGATCGACTCGTGTCTTCAGGATACAACAATAGTCTGCCAAAAGAAGATTTATCGCAA
AGCATTACGGCGAATGGACCATTTGGAGGAAGTTGTCAGGTTCATGGCCCAGTGCCGCCACTCACCCATTGTAGTTCAGA
CGAAATAGCCGCCGTCCCCGATATGGATATCGGACCCTTAGGGATGAAAAGTCCCATTTTAAATAATCCAGCATTTTCCC
ACTCTAAATGCCTTCCTAAAATTCACAAAAGCTGTTTTTGTGTGCGCTTTATTGCAGAGCATACAAAAATGCAAGAGGAC
TCAACTAAAGTTAAAGAGGATTGGAAATACGTTGCTATGGTATTGGATAGACTTTTTTTGTGGATATTCACGTTGGCAGT
TGTGGTTGGGACCGCCGGAATAATTTTACAAGCTCCTACGTTATATGACGACCGCATCCCGATTATTGAGCAAAAGGATT
TGGACTTTTCAGGAACATCAGCCGGTCGCTGTAGACCTCCACAATAACATTATTATATTAAAAGAATTTAATTTTAAACT
GAGGTGTATCAGATTATTATTACAAAATGAACTTTAACTAATATTTTCTGCAGGAAAAAATGTTAAAAATTACATATGTG
TGTATTGAAGGCTTTAAGTAACAAATTACCTATTTTTTATTTTTGACCACATTTAGATATTCCAAAGTAATTTGGTATTC
TTAGGCACTTCAAACCACGACATTTTTTTTATTTATCCTTGTCAACGAACTTAAAGAATAAAATTTTAACATTTTAATCT
TAAACCAGAAATGCAGAAATGTTGATTACGATCTTACATATTCGAAAGAGCACACAAAACAACAAATCCATAAAGTGTTC
AGCTTTTCAAATATACATTTACAAGAAAAACGGTTTAGTGTGAAAATAGCTTCGAAGAAGTGCAATCATCCGTTACTCGT
AGAAAAAAAGGGTACACTAGATTCGATGAAGGAAAAGGCTTAATCGCATAAGGAGTATTAATTCGATGCAATGTCCGTCG
GTTAGTCTGTATAAATGTCAAGATGTCTCAGCTTAAGTTTGTTTAAGATTGTTGCCATGCCCGCATTAACGAATAAAACC
CGCTCAAAACTGTCACCCAAATAATTTTCAGCTCTACGACGCATATTAAAAAAAGATGTCTTGTACATTTTTTTTAGAGC
AAAGGCTATTGAGGCATTCACCAGTCGCATGTCGACTACCCCATGCAAATAAATGAAACTGTAAACTTGTTGTGCAGATT
CTACCGTACTTTTTTTTCAGTCGGAGAATACCGACTGGCTACGCTTCATGAGGATACAAATTTTTATGAGATGATTAGTA
TTTATTTCATATTTAATTAGTAATAGCATCATTTAAAAATTAATATCTTTGTGAGTTCGATGTAGTTGAGTTTCCCAACT
ATTAGATACCTGTTACTCAACTAGTAGAAGTGCGAACAAGAAATTTTAAAAACTTTATTGCATATGGATAAAAATTGGGA
AAAAATAAAATGAAGAAAACAAATTTTTTAATTTTTCAAAAGAATGGGCGATATAGTTCTGGACGGTTTGTTTGTCTTCG
AAAAGGCGTGGCCAAAATGTTATAAAACAAAAAATTGGCAGGACAAATAATAAACGAAAAAACACCAAAACATTTGTCAG
AATGTTGGGCGAGGCAGTCTTACCTGGATCGTGGGCGTATAAAGATCAACTTAAAAATTAACTTTCTAGCTATCATGGCC
ACATCGAGTCGGATATTGAGAAAAATACTTAACAGGGTCTGAGACGATTCCAACTACTTGATACCTACTTTATATCGAAT
CTAGTACACTCCTTTATTCAAAGGGTATTAAAATTCCGAAATAGGCAAATTATTTCAATATGTCAATAGACAGTTTACAA
AAACTCTTATATATAATATACAATGTATGGTATTGTTTTCAACTTGCATTTTCAATCACTTATTCGTACACTTAAGTTCA
CTTATGTGCGTACAATTTTTTTCCAGGACAATATTAATTGACATAGCATAACATTTTGGAGGCGTTACACATGTCGTGAG
CATTAAGTATTTCCGGCGGTTCTATTTATTTTGTTTATGACAATATTCAATTTTAATTTTAAACACGAATGGATATATAT
TTTCTAGCCATATCCGTTTGCTCGAAAGCTTGTCTGCTGCTCTTTTTTCCGCCCGAAAGAATCTTGAGAGGTTACGAACT
TTACATTTCGGCAAGACGATTATTATATATCCTTGAATGGGTGTGCCGAAAATAAACAGTTTTTATGTTGAATATCTTCA
AATAATTATTCGACGGTTCATATGACAGCTACATAAGTATTCGAAATAGTTTTGAGATTATAATTGAAATAAACCCGAAA
TGTTCAAATAGCTGGTATATACCGAACTGAAGCCTATCATGATCAGAAACAACGAAGCTTAGATTTCATTCCCATTATTT
ATTTTATATAGTGGTCGTCTTTAACCCATATTGAAGCAAAAATAATTAATGACAAAACGCAGAACAAAACAAATTATGAT
CAAAACAAAGGAAGAACCTTTTATTTTCTTACGATTATTCTTATTCCAGCTATTTTATGAGTGGTCCGATCCAGCCCCTT
CCGACTTTTTTATAATAAAAAGAGACTTGTTCACAAATTGTATGCAGATAATTTGCGTAGAAAATGACAGACAGACGGAT
CTACGGTCATAGCTATATCGACTCGGCTGTTAACTCTTGATACTGATGACCGAAATCAATATGCAACGGTATAAAAATAA
CATTATTACATTTACATTAACATTTACATTATAAGAAATATGAGATCACATCTCAGACAAATAGTCTAACCCTACGAGGC
ACGTAAACTTTCCGTCGTACTGAAGTCTTAAACTCTGCAAAGTCCTGTCACCCTACCCTTGTACGGGTGGTTGTAAATCA
ATCGTATAACTTTGTTTCTTCTCCCGCCCACTTAGCGAACCGAAACCGCCAACAACGCTCAGTGCAGTCGCCCACACTTC
TTTTATGTTTGACGCACACGAACCGCCCAAAACTCCAACGCCCACACTTATAAACATTTCATTTATTTTTGTCATTTTAA
TCCACAATATCTATCGATATGACAGAAAAACTATGAAATTTCGCGTTGGCAATTCCGCTAGCTGAGTAACGGGTATCTGC
AAGTCAAGCATTAGCATTAGTCGTTCTCTCTTGCAAACAATCTAATTTTCCTTTTCCATGCCCCAAGGAATTACAATAAA
TGAAACCCCTCGAATTGCCAATCTCGAAAAAATTAGTTTTTTCTGCCGTTTTTGAATATCTGCACTTCCTTCGTAATCCC
ACTGGGTATCTCGCATATGATGGTCAAAGAAATTTACTGTTTTTTTGATTTGTTTTAGAAATACTATTTTAAATTTGTCT
CCCTGCCTTTGTTGTTTTAAATAAATGGATGGAGAAGGCAAAAGAGCCGACGAGCCATGGTATTTATACATTTTAAATTG
ATCCAAAAAGTAAAATAAAAGTAGTTTGCTATATCTAGATGGCGTTGAATATTACTGTCCAACTAACCAAAGTTCACTTG
TCTCAGATTTTAACTTAATTTGGAGCTTTATACAGTATACAGAAGATTTTATTTCACCACCTATCATAATTCAAATTAAA
ATTGTTTTTGAAATAGTAAAGCGGTAAATTAAAAACTATATGTCTATGAAAATCTGTCTATAAAAATATGTATAATTTGA
TTAAATTAATTTTTCATTTGTAAGAATTACTATAATTATTTAAAATTTAAAAACTCTTGTACGGCTTTTTGACTCAAAAT
CTTTGCTTACAAAAAAGATTTGTCCCCGCATAAGTCAACACGGTGTTGACATGGTGTTCTCATGGTACTCAAAAATAATT
AAGTATGTATCAAAGTATTAGTGCGAAAAAATGTGAAATAGAAAGTTAACATTTTAGCATATAGGAATACAACTATTAAA
ATGAATTTAAATGTATGAATTTGTTACAAAATAAAGTTAATTTAT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        nAChRα4-RC
        FBtr0300118
        5645
        nAChRα4-RD
        FBtr0308330
        5464
        nAChRα4-RE
        FBtr0308331
        1509
        nAChRα4-RF
        FBtr0308332
        2354
        nAChRα4-RG
        FBtr0332872
        2281
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        nAChRα4-PH
        FBpp0312320
        539
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        nAChRα4-PC
        FBpp0289395
        539
        nAChRα4-PD
        FBpp0300649
        371
        nAChRα4-PE
        FBpp0300650
        384
        nAChRα4-PF
        FBpp0300651
        371
        nAChRα4-PG
        FBpp0305094
        499
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        Alternative exon (coding exon 4) supported by MXE analysis (FBrf0222673).

        transcript_exception: non_canonical_splice_site

        Unconventional splice site postulated (GA-AG); supported by multiple cDNAs, RNA-seq data, and conservation across close Drosophila species.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (1)
        Reported As
        Symbol Synonym
        nAChRα4-RH
        Secondary FlyBase IDs
          References (0)