FlyBase Aberration Report: Dmel\Df(2L)Sd77

General Information

Symbol

Df(2L)Sd77

Species

D. melanogaster

Name

Deficiency (2L) Segregation distorter

FlyBase ID

FBab0001560

Feature type

chromosomal_deletion

Also Known As

SD-Mad^R77, SD^R77, Df(2L)SD^R77

Computed Breakpoints include

37C2-37C7;38C1-38C2

Features within 37C2--38C2

Sequence coordinates

2L:19,171,128..19,173,628 [+] (Df(2L)Sd77:bk1)

(Stathakis et al., 1995)

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

(Brittnacher and Ganetzky, 1983)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Pauli et al., 1995, Stathakis et al., 1995, Brittnacher and Ganetzky, 1983)

Breakpoints

37D1-37D2;38C1-38C2

(Pauli et al., 1995, Brittnacher and Ganetzky, 1983)

37C6-37D1;38C1-38C2

(Stathakis et al., 1995)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

brat << bk1 << γTub37C << l(2)38Aa << bk2 << ms(2)38C

Genetic mapping information

Comments

Breakpoint 1 was mapped to a XhoI-ClaI restriction fragment based on Figure 6. The position of the restriction fragment on the reference sequence was inferred by a FlyBase curator.

(Stathakis et al., 1995)

Distal breakpoint +47.05 - +52.55 kb <up>for coordinates see deficiency map under l(2)37</up>

Comments on Cytology

Ref: FBrf0039473.

(Stathakis et al., 1995)

Left limit of break 1 from polytene analysis (FBrf0084402) Right limit of break 1 from inclusion of γTub37C (FBrf0084402) Limits of break 2 from polytene analysis (FBrf0039473)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Acn

(Wright, 1996, Stathakis et al., 1995)

amd

(Wright, 1996, Stathakis et al., 1995)

amos

(Brittnacher and Ganetzky, 1983)

AsnRS

(Wright, 1996, Stathakis et al., 1995)

brat

(Stathakis et al., 1995, BDGP Project Members, 1994-1999, Brittnacher and Ganetzky, 1983)

cad

(Butler et al., 2001)

Catsup

(Wright, 1996, Stathakis et al., 1995)

crc

(Brittnacher and Ganetzky, 1983)

cub

(Wright, 1996, Stathakis et al., 1995)

DCTN6-p27

(Wright, 1996, Stathakis et al., 1995)

Ddc

(Wright, 1996, Stathakis et al., 1995, Brittnacher and Ganetzky, 1983)

E(SD)

(Brittnacher and Ganetzky, 1984)

Fs(2)Ket

(Butler et al., 2001)

hook

(Wright, 1996, Stathakis et al., 1995, Brittnacher and Ganetzky, 1983)

l(2)37Bb

(Wright, 1996, Stathakis et al., 1995)

l(2)37Cb

(Wright, 1996, Stathakis et al., 1995)

l(2)37Cd

(Wright, 1996, Stathakis et al., 1995)

l(2)38Db

(Butler et al., 2001)

l(2)k09314b

(BDGP Project Members, 1994-1999)

Lim3

(Wright, 1996, Stathakis et al., 1995)

mib2

(Wright, 1996, Stathakis et al., 1995)

ms(2)38C

(Brittnacher and Ganetzky, 1983)

Phb1

(Wright, 1996, Stathakis et al., 1995)

Polr1D

(Wright, 1996, Stathakis et al., 1995)

rdo

(Brittnacher and Ganetzky, 1983)

Rpn3

(Wright, 1996, Stathakis et al., 1995)

spir

(Butler et al., 2001)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

The Df(2L)Sd77 chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Heterozygosity for this deletion suppresses the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Stocks (2)

3178

106897

Notes on Origin

Discoverer

Induced on: SD-Mad.

(McLean et al., 1994, Temin, 1991, Brittnacher and Ganetzky, 1984)

Induced on: a In(2R)NS, In(2LR)SD72, SD-Mad chromosome.

(Brittnacher and Ganetzky, 1983)

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

37C6-37D1 breakpoint is between position +49.2 and +51.4 on the Ddc map relative to the HpaI restriction site near the 3' end of Ddc.

(Stathakis et al., 1995)

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

Df(2L)SD-Mad-d77

Df(2L)SD^R77

(Tio et al., 1994)

Df(2L)Sd77

(Popkova et al., 2012, Casso et al., 2008, Kuranaga et al., 2006)

Df(2L)Sd^R77

(Brittnacher and Ganetzky, 1983)

SD-Mad^R77

(McLean et al., 1994, Temin, 1991, Brittnacher and Ganetzky, 1984)

SD-Mad^Rev77

(Merrill et al., 1999)

SD^R77

(Hirose et al., 2001, Yamaguchi et al., 1999)

Name Synonyms

Deficiency (2L) Segregation distorter

Secondary FlyBase IDs

References (22)

Report Sections

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