FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Allele: Dmel\AMPKαΔ39
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General Information
Symbol
Dmel\AMPKαΔ39
Species
D. melanogaster
Name
FlyBase ID
FBal0246370
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Allele class
Nature of the Allele
Allele class
Caused by aberration
Cytology
Description

Imprecise excision of the progenitor insertion, resulting in a deletion that removes the entire CG3719 gene as well as the 3' untranslated region and last 39 codons of SNF1A.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Comment:

Approximate boundaries of 2777 bp deletion resulting from the imprecise excision of P{SUPor-P}KG09204. The excision is reported to remove the terminal 39 codons of AMPKalpha as well as all of CG3719.

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Hemizygous larvae are smaller than wild-type larvae from the late second instar onwards, with the defect becoming more striking during the third instar. The moult from second to third instar is delayed by approximately 12 hours in mutant animals, and the third instar is extended by two days compared to controls. Mutant animals fail to undergo metamorphosis, dying at the end of the third larval instar or shortly after, forming abnormal elongated pupae.

Whole body triglyceride levels are significantly decreased in mutant third instar larvae compared to wild type.

Fat body cells are smaller than in controls in mutant third instar and wandering larvae. However, homozygous clones of cells in the larval fat body are equal in size to the surrounding heterozygous cells and starvation has no differential effect on cell size within the mutant clones.

Homozygous third instar larvae have a pronounced brush border in the midgut epithelia (as occurs in wild type), but the mutant midgut epithelial cells show marked vacuolation. The midgut musculature has a ragged appearance in late mutant third instar larvae, with both the circular and longitudinal muscles being smaller than in controls. The thickness of the hindgut muscle fibres is also reduced in the mutant larvae compared to wild type.

Mutant third instar larvae transferred to dyed food show a similar amount of dyed food in their gut as control larvae after 24 hours feeding. However, the mutant larvae show a defect in gut clearance, with significant amounts of dyed food remaining in their guts even 24 hours after removal of the dyed food (most wild-type larvae clear the dyed food from their guts within 10 hours).

Peristaltic contractions are not seen in freshly dissected mutant third larval instar midguts, in contrast to the spontaneous muscle contraction seen in the majority of wild-type guts.

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference

The ragged appearance of the midgut musculature that is seen in SNF1AΔ39 third instar larvae is rescued by expression of sqhE20E21.Scer\UAS.cCa under the control of Scer\GAL4how-24B.

The reduced gut function seen in SNF1AΔ39 mutant larvae is rescued by expression of sqhE20E21.Scer\UAS.cCa under the control of Scer\GAL4how-24B.

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Partially rescued by
Comments

Ubiquitous expression of SNF1AScer\UAS.cBa rescues the lethality of SNF1AΔ39 mutants.

Ubiquitous expression of SNF1AK56R.Scer\UAS fails to rescue the lethality of SNF1AΔ39 mutants.

The reduced gut function seen in SNF1AΔ39 mutant larvae is rescued by expression of SNF1AScer\UAS.cBa under the control of either Scer\GAL4Mef2.PR or Scer\GAL4how-24B, but is not rescued by expression of SNF1AScer\UAS.cBa under the control of Scer\GAL4Mhc.PW.

The ragged appearance of the midgut musculature that is seen in SNF1AΔ39 third instar larvae is rescued by expression of SNF1AScer\UAS.cBa under the control of Scer\GAL4how-24B.

The reduced triglyceride content of SNF1AΔ39 mutant larvae is rescued by expression of SNF1AScer\UAS.cBa under the control of Scer\GAL4how-24B.

Expression of SNF1AScer\UAS.cBa under the control of Scer\GAL4how-24B rescues the early pupal lethality of SNF1AΔ39 animals, permitting the completion of metamorphosis in 49% animals. Most of the rescued animals do not eclose, but those that do eclose survive for up to 4 days as adults.

Expression of SNF1AScer\UAS.cBa under the control of Scer\GAL4Mef2.PR rescues pupal lethality, but not eclosion, in 9% of SNF1AΔ39 animals.

Images (0)
Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
AMPKαΔ39
SNF1AΔ39
dAMPKαΔ39
Name Synonyms
Secondary FlyBase IDs
    References (1)