FlyBase Gene Report: Dmel\Rnf11

General Information

Symbol

Dmel\Rnf11

Species

D. melanogaster

Name

Ring finger protein 11

Annotation Symbol

CG32850

Feature Type

protein_coding_gene

FlyBase ID

FBgn0052850

Gene Model Status

Current

Stock Availability

19 publicly available

Enzyme Name (EC)

Gene Summary

Contribute a Gene Snapshot for this gene.

All Summaries

Alliance
Auto summary
Gene Group
Interactive Fly

Key Links

Genomic Location

Cytogenetic map

102B3-102B5

Sequence location

4:314,923..331,387 [+]

Recombination map

4-0

RefSeq locus

NC_004353 REGION:314923..331387

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

NCBI

UCSC

Ensembl

Function

Gene Ontology (GO) Annotations (7 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

enables ubiquitin protein ligase activity

inferred from sequence or structural similarity with UniProtKB:Q9Y3C5

(Gene Ontology Curators, 2002-)

inferred from biological aspect of ancestor with PANTHER:PTN002304823

(GO Reference Genome Project, 2011-)

enables ubiquitin-protein transferase activity

inferred from sequence or structural similarity with UniProtKB:Q9Y3C5

(Gene Ontology Curators, 2002-)

enables zinc ion binding

inferred from sequence model

(Ying et al., 2011)

Biological Process (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

acts_upstream_of_negative_effect regulation of dopamine secretion

inferred from mutant phenotype

(Privman Champaloux et al., 2021)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

involved_in protein autoubiquitination

inferred from sequence or structural similarity with UniProtKB:Q9Y3C5

(Gene Ontology Curators, 2002-)

involved_in ubiquitin-dependent protein catabolic process

inferred from sequence or structural similarity with UniProtKB:Q9Y3C5

(Gene Ontology Curators, 2002-)

inferred from biological aspect of ancestor with PANTHER:PTN002304823

(GO Reference Genome Project, 2011-)

Cellular Component (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

part_of ubiquitin ligase complex

inferred from sequence or structural similarity with UniProtKB:Q9Y3C5

(Gene Ontology Curators, 2002-)

inferred from biological aspect of ancestor with PANTHER:PTN002304823

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

UNCLASSIFIED RING DOMAIN UBIQUITIN LIGASES

Protein Family (UniProt)

Protein Signatures (InterPro)

Catalytic Activity (EC/Rhea)

ubiquitin protein ligase activity

Summaries

Gene Group (FlyBase)

UNCLASSIFIED RING DOMAIN UBIQUITIN LIGASES -: This group comprises RING domain ubiquitin ligases that do not classify under other groups in FlyBase.

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\Rnf11 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q8SX35)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.46

Gene model reviewed during 5.47

Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Rnf11-RA

FBtr0089123

NM_166753

2311

147

Rnf11-RB

FBtr0333680

NM_001272124

3965

146

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

Rnf11-PA

FBpp0088192

16.4

147

5.58

FBpp0305836

16.3

146

5.58

L0MLM5

NP_001259053

AGB96543

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Rnf11 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CG32850_1

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.97

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 16 -- 17

larval central nervous system | faint

(Park et al., 2011)

Additional Descriptive Data

CG32850 transcript is expressed at a weak to moderate level in the CNS of late stage embryos.

(Park et al., 2011)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Rnf11 in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Rnf11

View exonic expression by tissue for Dmel\Rnf11

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

318246/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0052850

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0052850

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0052850

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG32850

Flygut - An atlas of the Drosophila adult midgut

FBgn0052850

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 10 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 6 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Rnf11

Transgenic constructs containing regulatory region of Rnf11

Aberrations (Deficiencies and Duplications) ( 7 )

Inferred from experimentation ( 7 )

Gene disrupted in

Df(4)5-M244

(Sun et al., 2004)

Df(4)5-M275

(Sun et al., 2004)

Df(4)BH

(Schinaman et al., 2014)

Gene duplicated in

(Sun et al., 2004)

(Sun et al., 2004)

(Sun et al., 2004)

(Sun et al., 2004)

Inferred from location ( 7 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable

Rnf11^e04618

Sterility

Allele

female fertile

female fertile (with Df(4)5-M244)

female fertile (with Df(4)ED6369)

fertile

Rnf11^e04618

Other Phenotypes

Allele

increased cell size | larval stage | somatic clone, with Scer\GAL4^Act.PU

Rnf11^HMJ22085

Phenotype manifest in

Allele

embryonic/larval midgut cell | larval stage | somatic clone, with Scer\GAL4^Act.PU

Rnf11^HMJ22085

larval ventral nerve cord | third instar larval stage, with Scer\GAL4^ple.PU

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (19)

Hsap\RNF11

13 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (18)

Rnor\Rnf11l1

12 of 14

Yes

Rnor\Rlim

1 of 14

Rnor\Rnf6

1 of 14

Rnor\Rnf11l2

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Mus musculus (laboratory mouse) (19)

Mmus\Rnf11

12 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Xenopus tropicalis (Western clawed frog) (14)

Xtro\rnf11

8 of 13

Yes

Xtro\rnf11.2

6 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Danio rerio (Zebrafish) (17)

Drer\rnf11a

13 of 14

Yes

Drer\rnf11b

13 of 14

Yes

Drer\si:ch211-59o9.10

2 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (5)

Cele\C01G6.4

12 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

Anopheles gambiae (African malaria mosquito) (10)

Agam\AgaP_AGAP001358

1 of 12

Yes

Agam\AgaP_AGAP001530

1 of 12

Yes

Agam\AgaP_AGAP002028

1 of 12

Yes

Agam\AgaP_AGAP003554

1 of 12

Yes

Agam\AgaP_AGAP003561

1 of 12

Yes

Agam\AgaP_AGAP006367

1 of 12

Yes

Agam\AgaP_AGAP006611

1 of 12

Yes

Agam\AgaP_AGAP010356

1 of 12

Yes

Agam\AgaP_AGAP013357

1 of 12

Yes

Agam\AgaP_AGAP013371

1 of 12

Yes

Arabidopsis thaliana (thale-cress) (119)

Atha\AT1G20823

4 of 13

Yes

Atha\AT1G49200

4 of 13

Yes

Atha\AT2G27940

4 of 13

Yes

Atha\AT3G10910

4 of 13

Yes

Atha\AT3G18773

4 of 13

Yes

Atha\AT4G17245

4 of 13

Yes

Atha\AT5G01880

4 of 13

Yes

Atha\AT5G05280

4 of 13

Yes

Atha\AT5G47610

4 of 13

Yes

Atha\ATL8

4 of 13

Yes

Atha\RHA3A

4 of 13

Yes

Atha\RHA3B

4 of 13

Yes

Atha\AT1G49210

3 of 13

Yes

Atha\AT1G49220

3 of 13

Yes

Atha\AT1G49230

3 of 13

Yes

Atha\AT1G53010

3 of 13

Yes

Atha\AT2G28920

3 of 13

Yes

Atha\AT3G14320

3 of 13

Yes

Atha\AT4G10150

3 of 13

Yes

Atha\AT4G10160

3 of 13

Yes

Atha\AT4G15975

3 of 13

Yes

Atha\AT5G42200

3 of 13

Yes

Atha\ATL63

3 of 13

Yes

Atha\NIP2

3 of 13

Yes

Atha\SIS3

3 of 13

Yes

Atha\AT1G04790

2 of 13

Yes

Atha\AT1G23980

2 of 13

Yes

Atha\AT1G28040

2 of 13

Yes

Atha\AT1G33480

2 of 13

Yes

Atha\AT1G72220

2 of 13

Yes

Atha\AT1G74410

2 of 13

Yes

Atha\AT2G20030

2 of 13

Yes

Atha\AT2G25410

2 of 13

Yes

Atha\AT2G35910

2 of 13

Yes

Atha\AT2G42360

2 of 13

Yes

Atha\AT2G46493

2 of 13

Yes

Atha\AT2G46494

2 of 13

Yes

Atha\AT2G47560

2 of 13

Yes

Atha\AT3G03550

2 of 13

Yes

Atha\AT3G18930

2 of 13

Yes

Atha\AT3G61550

2 of 13

Yes

Atha\AT4G24015

2 of 13

Yes

Atha\AT4G28890

2 of 13

Yes

Atha\AT5G06490

2 of 13

Yes

Atha\AT5G07040

2 of 13

Yes

Atha\AT5G17600

2 of 13

Yes

Atha\AT5G36001

2 of 13

Yes

Atha\AT5G40250

2 of 13

Yes

Atha\AT5G57750

2 of 13

Yes

Atha\ATL2

2 of 13

Yes

Atha\ATL3

2 of 13

Yes

Atha\ATL4

2 of 13

Yes

Atha\ATL5

2 of 13

Yes

Atha\ATL6

2 of 13

Yes

Atha\BB

2 of 13

Yes

Atha\CNI1

2 of 13

Yes

Atha\RHA1B

2 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Atha\AT1G63840

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Atha\AT2G46160

1 of 13

Atha\AT2G46495

1 of 13

Yes

Atha\AT3G19910

1 of 13

Atha\AT3G20395

1 of 13

Yes

Atha\AT3G60080

1 of 13

Atha\AT3G60966

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Atha\AT4G30400

1 of 13

Atha\AT4G33565

1 of 13

Atha\AT4G35840

1 of 13

Yes

Atha\AT4G38140

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Atha\AT5G66070

1 of 13

Yes

Atha\ATCRT1

1 of 13

Atha\ATL1F

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Atha\RHA2A

1 of 13

Yes

Atha\RHA2B

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Saccharomyces cerevisiae (Brewer's yeast) (1)

Scer\ASR1

1 of 13

Yes

Schizosaccharomyces pombe (Fission yeast) (4)

Spom\meu34

2 of 12

Yes

Spom\SPAP32A8.03c

1 of 12

Spom\SPBC2A9.04c

1 of 12

Spom\SPBC15C4.06c

1 of 12

Yes

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:Rnf11. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (9)

1 of 13

1 of 13

1 of 13

1 of 13

gol

1 of 13

gzl

1 of 13

Iru

1 of 13

mura

1 of 13

nopo

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

RNF11; ring finger protein 11

13 of 14

612598

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

Summary of Genetic Interactions

Interaction Browsers

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

76842

DroID - A comprehensive database of gene and protein interactions.

FBgn0052850

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

Class of Gene

nuclear_gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

4-0

Cytogenetic map

102B3-102B5

Sequence location

4:314,923..331,387 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

102B3-102B5

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

4-0

(FlyBase, 2016)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (19)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

60865

y¹; Mi{MIC}Rnf11^MI14327

31554

y¹ v¹; P{TRiP.JF01121}attP2

44570

y¹ v¹; P{TRiP.HMS02866}attP40

58136

y¹ v¹; P{TRiP.HMJ22085}attP40

93851

y¹ w¹¹¹⁸; PBac{UAS-Rnf11.HA}VK00037

93852

y¹ w¹¹¹⁸; PBac{UAS-Rnf11.HA}VK00033

605329

y¹ w¹¹¹⁸; TI{TI}FRT101F Rnf11^A

605330

y¹ w¹¹¹⁸; TI{TI}FRT101F Rnf11^F

Kyoto

118770

y¹ w¹¹¹⁸; PBac{UAS-Rnf11.HA}VK00037

118771

y¹ w¹¹¹⁸; PBac{UAS-Rnf11.HA}VK00033

NIG-Fly

HMS02866

y¹ v¹; P{TRiP.HMS02866}attP40/CyO

HMJ22085

y¹ v¹; P{TRiP.HMJ22085}attP40/CyO

More stocks available...

Genomic Clones (10)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (35)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

DPiM_RE41137

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0052850

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0052850

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

New annotation (CG32850) in release 3 of the genome annotation.

(FlyBase Genome Annotators, 2002-2003)

Relationship to Other Genes

Source for database merge of

Source for merge of: CG32850 BEST:GH26713

(Rana, 2004.7.8)

Source for merge of: CG32850 BcDNA:RE41137

(FlyBase, 1996-)

Additional comments

Source for merge of CG32850 BcDNA:RE41137 was a shared cDNA ( date:030728 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Source for identity of: Rnf11 CG32850

(Privman Champaloux et al., 2021)

Nomenclature comments

Etymology

Named 'Rnf11' after the human homolog.

(Privman Champaloux et al., 2021)

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

BEST:GH26713

BcDNA:RE41137

CG32850

(Privman Champaloux et al., 2021, Sidorenko et al., 2019, Bartok et al., 2015, Herz et al., 2012, Du et al., 2011, Park et al., 2011, Ying et al., 2011, Ni et al., 2010.12.1, Lebo et al., 2009, Ni et al., 2008, Lipatov et al., 2005)

RNF-11

(Park et al., 2011)

RNF11

(Privman Champaloux et al., 2021, Surguchov, 2021)

Rnf11

(Qu et al., 2024, Fourth Chromosome Resource Project and Newfeld, 2022-)

dRNF11

(Privman Champaloux et al., 2021)

Name Synonyms

Ring finger protein 11

Secondary FlyBase IDs

FBgn0046280
FBgn0062444

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 38 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

318246

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q8SX35

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q8SX35

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

318246/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0052850

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0052850

FlyMine - An integrated database for Drosophila genomics

FBgn0052850

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG32850

MARRVEL_MODEL - MARRVEL (model organism gene)

318246

Linkouts

BioGRID - A database of protein and genetic interactions.

76842

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0052850

DroID - A comprehensive database of gene and protein interactions.

FBgn0052850

DRSC - Results frm RNAi screens

FBgn0052850

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CG32850_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0052850

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0052850

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG32850

Flygut - An atlas of the Drosophila adult midgut

FBgn0052850

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC004296

References (38)

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