FB2026_03 , released September 17, 2026
Human Disease Model Report: episodic ataxia, type 1
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General Information
Name
episodic ataxia, type 1
FlyBase ID
FBhh0001541
Disease Ontology Term
Parent Disease
Overview

This report describes episodic ataxia, type 1 (EA1); EA1 exhibits autosomal dominant inheritance. The human gene implicated in this disease in KCNA1, which encodes a voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes, primarily in the brain and the central nervous system. There are multiple related genes in human that correspond to a single orthologous gene in Drosophila, Sh : Sh is the only KCNA-type potassium channel in flies; it is orthologous to 8 genes in this family in human. Many genetic reagents have been generated for Dmel\Sh, including classical loss-of-function alleles, RNAi targeting constructs, alleles caused by insertional mutagenesis, overexpression constructs, and a CRISPR/Cas9-based TKO construct.

The human Hsap\KCNA1 gene has been introduced into flies and stocks are available. It has not been used in context of this disease model.

The Drosophila model makes use of the Sh5 allele; hemizygous Sh5 males exhibit an anesthesia-induced leg shaking phenotype and various neurological defects. The Sh5 mutational lesion is analogous to an EA1-implicated variant ( KCNA1:p.Phe331Ile ). The Sh5 mutation also corresponds to a similar change at the analogous position for KCNA2 that is implicated in a form of developmental and epileptic encephalopathy ( KCNA2:p.Phe333Leu ; ClinVar:575248). The Drosophila model has been used to assess the efficacy of a candidate therapeutic drug.

[updated Nov. 2023 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: episodic ataxia
Symptoms and phenotype

Episodic ataxia is a neurologic condition characterized by spells of incoordination and imbalance, often associated with progressive ataxia (Jen et al., 2007; pubmed:17575281). [from MIM:160120; 2017.06.27]

Specific Disease Summary: episodic ataxia, type 1
OMIM report

[EPISODIC ATAXIA, TYPE 1; EA1](https://omim.org/entry/160120)

Human gene(s) implicated

[POTASSIUM CHANNEL, VOLTAGE-GATED, SHAKER-RELATED SUBFAMILY, MEMBER 1; KCNA1](https://omim.org/entry/176260)

Symptoms and phenotype

Episodic ataxia type 1 (EA1) is a potassium channelopathy characterized by constant myokymia and dramatic episodes of spastic contractions of the skeletal muscles of the head, arms, and legs with loss of both motor coordination and balance. Onset is usually in childhood or early adolescence. [GeneReviews, NBK25442; 2023.10.31]

Symptoms include continuous muscle movement (myokymia) and periodic ataxia. [from MIM:160120; 2023.10.31]

Genetics

Episodic ataxia-1 (EA1) is caused by heterozygous mutation in the potassium channel gene KCNA1. [from MIM:160120; 2023.10.31]

Cellular phenotype and pathology
Molecular information

KCNA1 encodes a voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes, primarily in the brain and the central nervous system, and also in the kidney. The functional channel is a homotetramer. [GeneCards, KCNA1; 2023.10.31]

External links
Disease synonyms
EA1
episodic ataxia with myokymia
myokymia 1
Search term: potassium channelopathy
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: multiple human genes to 1 Drosophila gene.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    Shaker (Sh) encodes the structural alpha subunit of a voltage-gated potassium channel. It plays a key role in maintaining electrical excitability in neurons and muscle cells, as well as regulating neurotransmitter release at the synapse. [Date last reviewed: 2019-03-14]
    Gene Groups / Pathways
    Comments on ortholog(s)

    High-scoring ortholog of the human KCNA genes (1 Drosophila to 8 human).

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (2 groups)
      protein-protein
      Interacting group
      Assay
      References
      pull down, anti tag western blot, molecular weight estimation by staining, isothermal titration calorimetry, predetermined participant, two hybrid, surface plasmon resonance
      anti tag coimmunoprecipitation, anti tag western blot, western blot, anti bait coimmunoprecipitation
      Alleles Reported to Model Human Disease (Disease Ontology) (6 alleles)
      Models Based on Experimental Evidence ( 4 )
      Modifiers Based on Experimental Evidence ( 3 )
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      ethyl methanesulfonate
      amorphic allele - genetic evidence
      gamma ray
      ethyl methanesulfonate
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      References (8)