FB2026_02 , released June 18, 2026
Human Disease Model Report: spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1
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General Information
Name
spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1
FlyBase ID
FBhh0001581
Overview

This report describes spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1, a neurologic disorder characterized by onset of gait disturbances. The human gene implicated is TDP1, which encodes tyrosyl-DNA phosphodiesterase 1. There is one high-scoring fly ortholog, Dmel\gkt, for which multiple genetic reagents, including classical alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated.

Human TDP1 has not been introduced into flies.

Mushroom body-specific RNAi knockdown of Dmel\gkt significantly affects both startle-induced and spontaneous motor behavior.

[updated Jun. 2024 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: spinocerebellar ataxia, autosomal recessive, with axonal neuropathy
Symptoms and phenotype

Spinocerebellar ataxia with axonal neuropathy is an autosomal recessive neuromuscular disorder typically characterized by onset in the first or second decade of gait disturbance, slowly progressive distal muscle weakness, and axonal sensorimotor neuropathy with distal sensory impairment. [from MIM:218387, MIM:607250; 2020.07.14]

Specific Disease Summary: spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1
OMIM report

[SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE, WITH AXONAL NEUROPATHY 1; SCAN1](https://omim.org/entry/607250)

Human gene(s) implicated

[TYROSYL-DNA PHOSPHODIESTERASE 1; TDP1](https://omim.org/entry/607198)

Symptoms and phenotype

Spinocerebellar ataxia with axonal neuropathy-1 (SCAN1) is an autosomal recessive neurologic disorder characterized by onset of gait disturbances in the first or second decades of life. Affected individuals have cerebellar ataxia associated with cerebellar atrophy on brain imaging, as well as an axonal sensorimotor neuropathy with distal sensory impairment, hypo- or areflexia, pes cavus, and steppage gait (summary by Takashima et al., 2002, pubmed:12244316). [from MIM:607250; 2024.06.05]

Genetics

Ataxia-telangiectasia-like disorder-1 (ATLD1) is caused by homozygous mutation in the TDP1 gene on chromosome 14q31. [from MIM:607250; 2024.06.05]

Cellular phenotype and pathology
Molecular information

TDP1 encodes Tyrosyl-DNA Phosphodiesterase 1, a protein involved in repairing stalled topoisomerase I-DNA complexes by catalyzing the hydrolysis of the phosphodiester bond between the tyrosine residue of topoisomerase I and the 3-prime phosphate of DNA. This protein may also remove glycolate from single-stranded DNA containing 3-prime phosphoglycolate, suggesting a role in repair of free-radical mediated DNA double-strand breaks. This gene is a member of the phospholipase D family and contains two PLD phosphodiesterase domains. [provided by RefSeq, Aug 2016]

External links
Disease synonyms
SCAN1
spinocerebellar ataxia with axonal neuropathy-1
spinocerebellar ataxia with axonal neuropathy type 1
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one (1 human to 1 Drosophila); TDP1 has one high-scoring Drosophila ortholog, gkt.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      Tyrosyl-DNA phosphodiesterase 1 (Tdp1) encodes a member of the phospholipase D superfamily. It is essential for the formation of epithelial polarity and nervous system development. [Date last reviewed: 2019-03-07]
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human TDP1 (1 Drosophila to 1 human).

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (4 groups)
        RNA-protein
        Interacting group
        Assay
        References
        protein-protein
        Interacting group
        Assay
        References
        experimental knowledge based, inferred by curator
        experimental knowledge based, inferred by curator
        experimental knowledge based, inferred by curator
        Alleles Reported to Model Human Disease (Disease Ontology) (1 alleles)
        Models Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Interaction
        References
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        References (4)