FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Human Disease Model Report: spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2
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General Information
Name
spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2
FlyBase ID
FBhh0000612
Overview

This report describes spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2 (SCAN2), one of several spinocerebellar ataxias with axonal neuropathy described in OMIM (see MIM:PS607250). This disease is also described as ataxia with oculomotor apraxia 2 (AOA2) and was formerly named spinocerebellar ataxia autosomal recessive 1 (SCAR1).

The human gene implicated in this disease is Senataxin (SETX), which encodes a probable RNA/DNA helicase involved in diverse aspects of RNA metabolism and DNA repair. There is a single ortholog in Drosophila, Setx, for which RNAi-targeting constructs and an allele caused by insertional mutagenesis have been generated. The SETX gene is also implicated in a second disease, amyotrophic lateral sclerosis 4 (see FBhh0000611.

Multiple UAS constructs of the human Hsap\SETX gene have been introduced into flies, including wild-type and variants associated with disease. Variant(s) implicated in human disease tested (as transgenic human gene, SETX): the R1363X variant form has been introduced into flies; this variant is associated with SCAN2.

The Drosophila Setx gene has not been genetically characterized.

[updated Jul. 2020 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: spinocerebellar ataxia, autosomal recessive
Symptoms and phenotype

Autosomal recessive cerebellar ataxias (ARCA) are a heterogeneous group of rare neurological disorders involving both central and peripheral nervous system, and in some case other systems and organs, and characterized by degeneration or abnormal development of cerebellum and spinal cord, autosomal recessive inheritance and, in most cases, early onset occurring before the age of 20 years (Palau and Espinos, 2006; pubmed:17112370).

The hereditary ataxias are a group of genetic disorders characterized by slowly progressive incoordination of gait and often associated with poor coordination of hands, speech, and eye movements. Frequently, atrophy of the cerebellum occurs. [from Gene Reviews, Hereditary Ataxia Overview; pubmed:20301317; 2017.06.16]

See also Jayadev and Bird, 2013 (pubmed:23538602).

Autosomal recessive spinocerebellar ataxia is a neurologic disorder characterized by onset of progressive gait difficulties, eye movement abnormalities, and dysarthria in the first or second decade of life (summary, Dy et al, 2105; pubmed:26224725). [from MIM:609270; 2020.07.13]

Parent Disease Summary: spinocerebellar ataxia, autosomal recessive, with axonal neuropathy
Symptoms and phenotype

Spinocerebellar ataxia with axonal neuropathy is an autosomal recessive neuromuscular disorder typically characterized by onset in the first or second decade of gait disturbance, slowly progressive distal muscle weakness, and axonal sensorimotor neuropathy with distal sensory impairment. [from MIM:218387, MIM:607250; 2020.07.14]

Specific Disease Summary: spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 2
OMIM report

[SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE, WITH AXONAL NEUROPATHY 2; SCAN2](https://omim.org/entry/606002)

Human gene(s) implicated

[SENATAXIN; SETX](https://omim.org/entry/608465)

Symptoms and phenotype

Autosomal recessive spinocerebellar ataxia-1 is a neurodegenerative disorder characterized by juvenile onset of progressive cerebellar ataxia, axonal sensorimotor peripheral neuropathy, and increased serum alpha-fetoprotein. Oculomotor apraxia is a common but inconsistent finding, found in about 50% of patients; hence this disorder is sometimes referred to as 'ataxia-oculomotor apraxia-2' (AOA2). [from MIM:606002; 2017.09.12]

Genetics

Autosomal recessive spinocerebellar ataxia-1 (SCAR1) is caused by homozygous or compound heterozygous mutation in the SETX gene. [from MIM:606002; 2017.09.12]

Cellular phenotype and pathology
Molecular information

SETX (Senataxin) encodes a probable RNA/DNA helicase involved in diverse aspects of RNA metabolism, DNA repair, and genomic integrity. [Gene Cards, SETX; 2017.09.12]

Moreira et al. (2004; pubmed:14770181) suggested that senataxin may have both RNA and DNA helicase activities and that senataxin acts in the DNA repair pathway, like several other proteins defective in autosomal recessive cerebellar ataxias. [from MIM:608465; 2017.09.12]

External links
Disease synonyms
AOA2
ataxia-oculomotor apraxia 2
ataxia with oculomotor apraxia type 2
SCAN2
SCAR1
spinocerebellar ataxia autosomal recessive 1
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
Symbol / Name
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

One to one: 1 human to 1 Drosophila.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      Moderate-scoring ortholog of human gene SETX (1 Drosophila to 1 human); Dmel\Setx shares 21% identity and 36% similarity with the human gene.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (0 groups)
        Alleles Reported to Model Human Disease (Disease Ontology) (8 alleles)
        Models Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 2 )
        Models Based on Experimental Evidence ( 5 )
        Modifiers Based on Experimental Evidence ( 2 )
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        References (5)