FlyBase Aberration Report: Dmel\Df(3R)kar3l

General Information

Symbol

Df(3R)kar3l

Species

D. melanogaster

Name

Deficiency (3R) karmoisin-3 lethal

FlyBase ID

FBab0002833

Feature type

chromosomal_deletion

Also Known As

Df(3R)kar^3l, Df(3R)kar31

Computed Breakpoints include

87C2;87D1

Features within 87C2--87D1

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Leonhardt et al., 1993, Reuter et al., 1987, Hall and Kankel, 1976, Lefevre, 1971)

Breakpoints

87B15-87C2;87C9-87D2

(Leonhardt et al., 1993, Hall and Kankel, 1976)

87C2-87C3;87C9-87D1

(Reuter et al., 1987)

87C2-87C3;87D1-87D2

(Lefevre, 1971)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Pp1-87B << bk1 << Vha55 << Men << bk2 << l(3)87Da

Genetic mapping information

Comments

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0047003) Right limit of break 1 from polytene analysis (FBrf0028767) Left limit of break 2 from inclusion of Men (FBrf0058575) Right limit of break 2 from polytene analysis (FBrf0047003)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

kar

(Leonhardt et al., 1993, Gausz et al., 1979)

l(3)87Cb

(Gausz et al., 1979)

l(3)87Cc

(Gausz et al., 1979)

l(3)87Cd

(Leonhardt et al., 1993, Gausz et al., 1979)

Men

(Leonhardt et al., 1993)

PolQ

(Leonhardt et al., 1993)

Vha55

(Gausz et al., 1979)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Ace

(Hall and Kankel, 1976)

E(var)87F

(Reuter et al., 1987)

l(3)87Db

(Leonhardt et al., 1993)

Pp1-87B

(Reuter et al., 1987)

Spc25

(Leonhardt et al., 1993)

Su(var)3-7

(Reuter et al., 1987)

Su(var)3-13

(Reuter et al., 1987)

Su(var)3-14

(Reuter et al., 1987)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Df(3R)kar3l/Df(3R)ry viable

NOT in combination with other aberrations

Stocks (2)

6160

108656

Notes on Origin

Discoverer

Schalet.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Retains the 87A and 87C puff.

(Ish-Horowicz et al., 1979)

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

Df(3R)kar31

(Lum and Merritt, 2011, Müller et al., 2005)

Df(3R)kar3l

(Chan et al., 2010)

Df(3R)kar^3L

(Reuter et al., 1987)

Df(3R)kar^3l

(Merritt et al., 2005, Braaten and Bentley, 1993, Burkhart et al., 1984, Ish-Horowicz and Pinchin, 1980, Gausz et al., 1979, Ish-Horowicz et al., 1979, Hall and Kankel, 1976)

kar^3l

(Lefevre, 1971)

Name Synonyms

Deficiency (3R) karmoisin-3 lethal

Secondary FlyBase IDs

References (19)

Report Sections

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