FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Aberration: Dmel\Df(1)ED409
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General Information
Symbol
Df(1)ED409
Species
D. melanogaster
Name
FlyBase ID
FBab0030011
Feature type
chromosomal_deletion
Computed Breakpoints include

[2C7-2C7];[2F5-2F5];

Features within 2C7--2F5
Genomic Maps
Sequence coordinates
X:2,042,227..2,042,227 (Df(1)ED409:bk1)
(DrosDel Project, 2007.6.25)
X:2,317,631..2,317,631 (Df(1)ED409:bk2)
(DrosDel Project, 2007.6.25)
Member of large scale dataset(s)
Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

(Ryder et al., 2007)
Nature of Aberration
Cytological Order
Progenitor
P{RS3r}CB-0780-3
(Ryder, 2003.6.17)
P{RS5r}5-HA-1028
(Ryder, 2003.6.17)
Mutagen
FLPase
(Ryder, 2003.6.17)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Ryder, 2003.6.17)
Breakpoints

2C7;2F5

(FlyBase Curators, 2008)
Causes alleles
Carries alleles
Transposon Insertions
P{3'.RS5+3.3'}ED409
(Ryder, 2003.6.17)
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

Confirmed by 3-step PCR confirmation as shown in http://www.drosdel.org.uk/del_confirm.php

(Ryder and Roote, 2005.11.4)

Limits of break 1 computationally determined from location of progenitor P insertion on genome sequence between P{EP}ActnEP1193&P{EP}CG4322EP1631 and P{EP}EP1460&P{EP}CG2924EP1596 Limits of break 2 computationally determined from location of progenitor P insertion on genome sequence between P{EP}EP1606 and P{EP}EP1605

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
temp
(Charng et al., 2014)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Rbcn-3B
(Yan et al., 2009)
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (62)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (3)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
Df(1)ED409
(Hope et al., 2019, Wang and Baker, 2015, Charng et al., 2014, Yamakawa et al., 2012, Yan et al., 2009, FlyBase Curators, 2008)
Name Synonyms
Secondary FlyBase IDs
    References (11)