FlyBase Gene Report: Dmel\galectin

General Information

Symbol

Dmel\galectin

Species

D. melanogaster

Name

galectin

Annotation Symbol

CG11372

Feature Type

protein_coding_gene

FlyBase ID

FBgn0031213

Gene Model Status

Current

Stock Availability

8 publicly available

Gene Summary

galectin (galectin) encodes a galactoside binding protein involved in synaptic target recognition. [Date last reviewed: 2019-09-12] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Interactive Fly

Also Known As

Dmgal

Key Links

Genomic Location

Cytogenetic map

21B1-21B1

Sequence location

2L:71,757..76,211 [+]

Recombination map

2-0.5

RefSeq locus

NT_033779 REGION:71757..76211

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (6 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (2 terms)

CV Term

Evidence

References

enables galactoside binding

inferred from direct assay

(Pace et al., 2002)

enables glycosylation-dependent protein binding

inferred from direct assay

(Sung et al., 2024)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

enables carbohydrate binding

inferred from electronic annotation with InterPro:IPR001079

(InterPro Project Members, 2004-)

inferred from biological aspect of ancestor with PANTHER:PTN000886516

(GO Reference Genome Project, 2011-)

enables galactoside binding

inferred from biological aspect of ancestor with PANTHER:PTN000886608

(GO Reference Genome Project, 2011-)

Biological Process (2 terms)

Terms Based on Experimental Evidence (2 terms)

CV Term

Evidence

References

involved_in synapse pruning

inferred from mutant phenotype

(Sung et al., 2024)

involved_in synaptic target recognition

inferred from mutant phenotype

(Kurusu et al., 2008)

Terms Based on Predictions or Assertions (0 terms)

Cellular Component (1 term)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

located_in cytosol

inferred from direct assay

(Pace et al., 2002)

Terms Based on Predictions or Assertions (0 terms)

Gene Group (FlyBase)

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

galectin (galectin) encodes a galactoside binding protein involved in synaptic target recognition. [Date last reviewed: 2019-09-12]

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\galectin for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q9VPI6)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.43

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.45

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

galectin-RA

FBtr0078101

NM_134643

1841

503

galectin-RB

FBtr0301733

NM_001169366

1694

402

galectin-RD

FBtr0306540

NM_001258884

1430

401

galectin-RE

FBtr0302164

NM_001169367

1458

419

galectin-RF

FBtr0331680

NM_001272859

1536

272

Additional Transcript Data and Comments

Reported size (kB)

1.5 (unknown)

(Pace et al., 2002)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

galectin-PA

FBpp0077760

57.6

503

6.38

FBpp0290947

45.9

402

7.14

FBpp0297498

45.9

401

6.70

FBpp0291374

47.7

419

5.30

FBpp0304069

31.1

272

7.91

C0PUZ0

NP_001259788

AGB92325

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

503 (aa); 58 (kD)

(Pace et al., 2002)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\galectin using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-2.12

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

organism

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

primordial germ cell

(Fisher et al., 2012)

embryonic stage 5

organism | ubiquitous

(Pace et al., 2002)

embryonic stage 7 -- 8

primordial germ cell

(Fisher et al., 2012)

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage & larval stage & adult stage

(Pace et al., 2002)

embryonic stage 6 -- 7

mesoderm anlage

(Pace et al., 2002)

embryonic stage 8 -- 11

embryonic foregut

(Pace et al., 2002)

embryonic hindgut

(Pace et al., 2002)

mesoderm

(Pace et al., 2002)

embryonic stage 8 -- 16

presumptive embryonic/larval central nervous system

(Pace et al., 2002)

embryonic stage 13 -- 15

embryonic visceral muscle cell

(Pace et al., 2002)

embryonic stage 13 -- 16

embryonic somatic muscle cell

(Pace et al., 2002)

larval stage

embryonic/larval hemocyte

(Pace et al., 2002)

embryonic/larval crystal cell

(Pace et al., 2002)

lamellocyte

(Pace et al., 2002)

embryonic/larval plasmatocyte

(Pace et al., 2002)

Additional Descriptive Data

galectin transcripts are detected in early embryos and are enriched in the presumptive mesoderm during gastrulation. During germ band extension, strong expression is observed in the mesoderm and nervous system and in the invaginating foregut and hindgut. In stages 13-15, expression is concentrated in the CNS and in the somatic and visceral musculature and continues at stage 16 in all but the visceral musculature. galectin transcripts are also observed in all circulating larval hemocytes.

(Pace et al., 2002)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

western blot

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage & larval stage & adult stage

(Pace et al., 2002)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in cytosol

inferred from direct assay

(Pace et al., 2002)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\galectin in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\galectin

View exonic expression by tissue for Dmel\galectin

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0031213

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

33162/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0031213

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0031213

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0031213

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG11372

Flygut - An atlas of the Drosophila adult midgut

FBgn0031213

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\galectin

Stages(s) 4-6
Stages(s) 13-16

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 11 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 9 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of galectin

Transgenic constructs containing regulatory region of galectin

Aberrations (Deficiencies and Duplications) ( 1 )

Inferred from experimentation ( 1 )

Gene disrupted in

Df(2L)Exel6001

(Ryder, 2004.4.26)

Inferred from location ( 5 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Phenotype manifest in

Allele

dendrite | P-stage, with Scer\GAL4^A58

galectin^wgv

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (20)

Hsap\LGALS4

11 of 14

Yes

Hsap\LGALS9B

11 of 14

Yes

Hsap\LGALS9C

10 of 14

Yes

Hsap\LGALS9

10 of 14

Yes

Hsap\LGALS8

8 of 14

Yes

Hsap\LGALS3

5 of 14

Yes

Hsap\CLC

4 of 14

Yes

Hsap\LGALS7B

4 of 14

Hsap\LGALS7

4 of 14

Yes

Hsap\LGALS13

4 of 14

Yes

Hsap\LGALS14

4 of 14

Yes

Hsap\LGALS16

4 of 14

Yes

Hsap\LGALSL

4 of 14

Yes

Hsap\LGALS1

3 of 14

Hsap\LGALS2

3 of 14

Yes

Hsap\LGALS12

3 of 14

Yes

Hsap\GRIFIN

2 of 14

Hsap\COL6A5

1 of 14

Yes

Hsap\GREB1L

1 of 14

Yes

Hsap\TRIO

1 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (12)

Rnor\Lgals4

11 of 14

Yes

Rnor\Lgals8

9 of 14

Yes

Rnor\Lgals9

9 of 14

Yes

Rnor\Lgals5

7 of 14

Yes

Rnor\Lgals3

5 of 14

Yes

Rnor\Lgals7

4 of 14

Yes

Rnor\Lgals12

4 of 14

Yes

Rnor\Grifin

3 of 14

Rnor\Lgals1

3 of 14

Yes

Rnor\Lgals2

3 of 14

Yes

Rnor\Lgalsl

3 of 14

Rnor\LOC501599

1 of 14

Yes

Mus musculus (laboratory mouse) (12)

Mmus\Lgals4

11 of 14

Yes

Mmus\Lgals9

10 of 14

Yes

Mmus\Lgals8

9 of 14

Yes

Mmus\Lgals6

8 of 14

Yes

Mmus\Lgals3

5 of 14

Yes

Mmus\Lgals7

5 of 14

Mmus\Lgals12

4 of 14

Mmus\Lgalsl

4 of 14

Yes

Mmus\Lgals1

3 of 14

Yes

Mmus\Lgals2

3 of 14

Yes

Mmus\Grifin

2 of 14

Mmus\Gm5065

1 of 14

Xenopus tropicalis (Western clawed frog) (18)

Xtro\lgals9c

9 of 13

Yes

Xtro\lgals9b

8 of 13

Yes

Xtro\lgals9

8 of 13

Yes

Xtro\lgals8

6 of 13

Yes

Xtro\lgals4.1

4 of 13

Yes

Xtro\lgals4.2

4 of 13

Yes

Xtro\lgals3

3 of 13

Yes

Xtro\lgalsl

2 of 13

Xtro\LOC116406955

2 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Xtro\lgals12

1 of 13

Yes

Xtro\LOC100492008

1 of 13

Yes

Xtro\LOC100496148

1 of 13

Yes

Xtro\sar1a

1 of 13

Danio rerio (Zebrafish) (20)

Drer\lgals9l4

10 of 14

Yes

Drer\lgals9l5

10 of 14

Yes

Drer\lgals9l6

10 of 14

Yes

Drer\lgals8a

9 of 14

Yes

Drer\lgals8b

9 of 14

Yes

Drer\lgals9l3

9 of 14

Yes

Drer\lgals9l1

8 of 14

Yes

Drer\lgals3a

6 of 14

Yes

Drer\lgals3b

5 of 14

Yes

Drer\lgals4

5 of 14

Yes

Drer\grifin

4 of 14

Yes

Drer\si:dkey-95h12.1

4 of 14

Yes

Drer\lgalsla

3 of 14

Drer\si:ch211-10a23.2

3 of 14

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

Yes

Drer\tsc22d3

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (31)

Cele\lec-4

9 of 14

Yes

Cele\lec-5

9 of 14

Yes

8 of 14

8 of 14

8 of 14

7 of 14

Yes

Cele\lec-12

5 of 14

Yes

4 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

3 of 14

2 of 14

2 of 14

Yes

Cele\lec-7

2 of 14

Cele\M6.11

2 of 14

Cele\T02G6.7

2 of 14

Yes

Cele\C09F9.1

1 of 14

Yes

Cele\C53D6.10

1 of 14

Yes

Cele\F38A1.11

1 of 14

Yes

Cele\F38A5.8

1 of 14

Yes

Cele\F40H6.5

1 of 14

Cele\lec-11

1 of 14

Cele\pqn-84

1 of 14

Anopheles gambiae (African malaria mosquito) (10)

Agam\GALE1

12 of 12

Yes

Agam\GALE2

5 of 12

Agam\GALE5

5 of 12

Yes

Agam\GALE6

5 of 12

Yes

Agam\GALE7

5 of 12

Yes

Agam\GALE9

5 of 12

Yes

Agam\GALE8

4 of 12

Yes

Agam\GALE4

3 of 12

Yes

Agam\GALE3

2 of 12

Agam\GALE10

1 of 12

Yes

Arabidopsis thaliana (thale-cress) (0)

Saccharomyces cerevisiae (Brewer's yeast) (0)

Schizosaccharomyces pombe (Fission yeast) (0)

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:galectin. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (4)

CG11374

10 of 13

ctg

7 of 13

CG13950

4 of 13

Pex23

2 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 1 )

Allele

Disease

Interaction

References

galectin^DG25505

ameliorates cardiomyopathy

modeled by Pp2B-14D^{act.tin.C.EYFP}

(Lee et al., 2014)

exacerbates nervous system disease

modeled by Atpα^DTS1

(Talsma et al., 2014)

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

11 of 14

11 of 14

10 of 14

10 of 14

8 of 14

5 of 14

CLC; Charcot-Leyden crystal galectin

4 of 14

4 of 14

4 of 14

4 of 14

4 of 14

4 of 14

LGALSL; galectin like

4 of 14

3 of 14

3 of 14

MYOCARDIAL INFARCTION, SUSCEPTIBILITY TO

LGALS12; galectin 12

3 of 14

606096

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

galectin - drpr

anti tag coimmunoprecipitation, anti tag western blot

(Sung et al., 2024)

Summary of Genetic Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Cdc50

suppressible

galectin|ctg

(Sung et al., 2024)

Pp2B-14D

suppressible

galectin

(Lee et al., 2014)

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

59425

DroID - A comprehensive database of gene and protein interactions.

FBgn0031213

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

Class of Gene

nuclear_gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-0.5

Cytogenetic map

21B1-21B1

Sequence location

2L:71,757..76,211 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

21B1-21B1

Limits computationally determined from genome sequence between P{lacW}spen^k06805&P{lacW}l(2)k13604^k13604 and P{lacW}U2af38^k14504

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

2-0.5

(FlyBase, 2016)

2-0.0

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (8)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

81472

y¹ v¹; P{TKO.GS04724}attP40

34880

y¹ sc^* v¹ sev²¹; P{TRiP.HMS01225}attP2

62672

w¹¹¹⁸; PBac{IT.GAL4}galectin^0154-G4 asRNA:CR44987^0154-G4

63422

w¹¹¹⁸; PBac{IT.GAL4}galectin^0580-G4 asRNA:CR44987^0580-G4

Kyoto

123098

w¹¹¹⁸; P{RS3}galectin^CB-0264-3

NIG-Fly

HMS01225

y¹ sc^* v¹ sev²¹; P{TRiP.HMS01225}attP2

VDRC

v107054

P{KK102208}VIE-260B

v318304

PBac{fTRG00953.sfGFP-TVPTBF}VK00033

Genomic Clones (11)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (26)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

RE32514

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0031213

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0031213

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

Relationship to Other Genes

Source for database merge of

Additional comments

Source for identity of galectin CG11372 was sequence comparison ( date:020316 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Source for identity of: galectin CG11372

(FlyBase, 1996-)

Nomenclature comments

Etymology

Synonyms and Secondary IDs (5)

Reported As

Symbol Synonym

CG11372

(Sung et al., 2024, Ni et al., 2011.7.19, Seinen et al., 2010, Keleman et al., 2009.8.5, Kurusu et al., 2008, Cooper, 2002)

Dmgal

(Lu et al., 2020, Pace et al., 2002)

galectin

(Li et al., 2020, Transgenic RNAi Project members, 2017-, Clandinin and Owens, 2016-, McMahon et al., 2016, Sarov et al., 2016, Ashwal-Fluss et al., 2014, Lee et al., 2014, Kurusu et al., 2008)

hdg

(Sung et al., 2024)

Name Synonyms

galectin

(Rushton et al., 2020, Blanco et al., 2010, Khokhar et al., 2008)

hidden dragon

(Sung et al., 2024)

Secondary FlyBase IDs

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 59 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

33162

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q9VPI6

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q9VPI6

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0031213

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

33162/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0031213

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0031213

FlyMine - An integrated database for Drosophila genomics

FBgn0031213

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG11372

MARRVEL_MODEL - MARRVEL (model organism gene)

33162

Linkouts

BioGRID - A database of protein and genetic interactions.

59425

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0031213

DroID - A comprehensive database of gene and protein interactions.

FBgn0031213

DRSC - Results frm RNAi screens

FBgn0031213

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0031213

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0031213

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG11372

Flygut - An atlas of the Drosophila adult midgut

FBgn0031213

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

References (43)

The following external sites may use different assemblies or annotations than FlyBase.

-2.12

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