FB2026_03 , released September 17, 2026
Human Disease Model Report: Cornelia de Lange syndrome 1
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General Information
Name
Cornelia de Lange syndrome 1
FlyBase ID
FBhh0000605
Disease Ontology Term
Parent Disease
Overview

This report describes Cornelia de Lange syndrome 1 (CDLS1), which is a subtype of Cornelia de Lange syndrome; CDLS1 exhibits autosomal dominant inheritance. The human gene implicated in this disease is NIPBL, cohesion loading factor, which contributes to the function of the Cohesion complex, which, in turn, ensures sister chromatid cohesion prior to segregation during mitosis or meiosis II. There is a single orthologous gene in Drosophila, Nipped-B, for which loss-of-function alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated.

The human NIPBL gene has not been introduced into flies.

Animals homozygous for loss-of-function mutations of Dmel\Nipped-B die during the larval stage; 50% of metaphase nuclei in the brains of second instar larvae show precocious sister chromatid separation. Nipped-B heterozygous mutant animals show reduced growth, defects in learning and memory, altered circadian rhythms, and morphological abnormalities in brain structure. Genetic and physical interactions of Dmel\Nipped-B have been described; see below and in the Nipped-B gene report.

[updated Sep. 2017 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: Cornelia de Lange syndrome
Symptoms and phenotype

Cornelia de Lange syndrome (CDLS) is a multisystem malformation syndrome recognized primarily on the basis of characteristic facial dysmorphism, in association with prenatal and postnatal growth retardation, mental retardation and, in many cases, upper limb anomalies. However, there is wide clinical variability in this disorder, with milder phenotypes that may be difficult to ascertain on the basis of physical features (summary by Rohatgi et al., 2010; pubmed:20583156). [from MIM:122470; 2017.09.08]

Specific Disease Summary: Cornelia de Lange syndrome 1
OMIM report

[CORNELIA DE LANGE SYNDROME 1; CDLS1](https://omim.org/entry/122470)

Human gene(s) implicated

[NIPPED-B-LIKE; NIPBL](https://omim.org/entry/608667)

Symptoms and phenotype

See general description of Cornelia de Lange syndrome.

Genetics

Cornelia de Lange syndrome-1 (CDLS1) is caused by heterozygous mutation in the NIPBL gene; about 50-60% of cases of CDLS are of this type. [from MIM:122470; 2017.09.08]

Cellular phenotype and pathology
Molecular information

Cohesin is a protein complex required for sister chromatid cohesion prior to segregation during mitosis or meiosis II. NIPBL forms a dimer with MAU2 that is essential for loading the cohesin complex onto sister chromatids. [from MIM:608667; 2017.09.08]

External links
Disease synonyms
CDLS1
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one: 1 human to 1 Drosophila.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      Nipped-B (Nipped-B) encodes a protein that interacts with the product of Mau2 to form the kollerin complex, which topologically loads the cohesin ring complex onto chromosomes. The product of Nipped-B and cohesin participate in transcriptional regulation and DNA repair. [Date last reviewed: 2019-03-14]
      Gene Groups / Pathways
        Comments on ortholog(s)

        High-scoring ortholog of human gene NIPBL (1 Drosophila to 1 human); Dmel\Nipped-B shares 27% identity and 42% similarity with the human gene.

        Orthologs and Alignments from DRSC
        DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
        Other Genes Used: Viral, Bacterial, Synthetic (0)
          Summary of Physical Interactions (9 groups)
          protein-protein
          Interacting group
          Assay
          References
          ion exchange chromatography, peptide massfingerprinting
          pull down, western blot, anti bait coimmunoprecipitation
          anti tag coimmunoprecipitation, peptide massfingerprinting
          anti tag coimmunoprecipitation, western blot
          anti tag coimmunoprecipitation, Identification by mass spectrometry
          anti tag coimmunoprecipitation, anti tag western blot
          anti tag coimmunoprecipitation, peptide massfingerprinting
          anti bait coimmunoprecipitation, western blot, pull down
          anti tag coimmunoprecipitation, anti tag western blot
          Alleles Reported to Model Human Disease (Disease Ontology) (3 alleles)
          Models Based on Experimental Evidence ( 2 )
          Modifiers Based on Experimental Evidence ( 1 )
          Allele
          Disease
          Interaction
          References
          Alleles Representing Disease-Implicated Variants
          Genetic Tools, Stocks and Reagents
          Sources of Stocks
          Contact lab of origin for a reagent not available from a public stock center.
          Bloomington Stock Center Disease Page
          Related mammalian, viral, bacterial, or synthetic transgenes
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila transgenes
          Allele
          Transgene
          Publicly Available Stocks
          RNAi constructs available
          Allele
          Transgene
          Publicly Available Stocks
          Selected Drosophila classical alleles
          Allele
          Allele class
          Mutagen
          Publicly Available Stocks
          loss of function allele
          gamma ray
          loss of function allele
          gamma ray
          loss of function allele
          gamma ray
          loss of function allele
          gamma ray
          loss of function allele
          P-element activity
          References (10)