FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Human Disease Model Report: developmental and epileptic encephalopathy 25, with amelogenesis imperfecta
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General Information
Name
developmental and epileptic encephalopathy 25, with amelogenesis imperfecta
FlyBase ID
FBhh0001403
Overview

This report describes developmental and epileptic encephalopathy 25, with amelogenesis imperfecta (DEE25); this disease is also described as a sub-type of Kohlschutter-Tonz syndrome. DEE25 exhibits autosomal recessive inheritance. The human gene implicated in this disease is SLC13A5, which encodes a sodium-dependent citrate cotransporter. The Drosophila gene Indy is a high-scoring ortholog of DEE25; there are multiple related genes in both human and fly. Multiple genetic reagents have been generated for Indy including RNAi-targeting constructs and alleles caused by insertional mutagenesis.

The human SLC13A5 gene has not been introduced into flies.

Animals carrying homozygous or trans-heterozygous loss-of-function mutations of Indy survive to adulthood; they exhibit bang-sensitivity, a phenotype similar to seizure sensitivity in humans (see FBhh0000268). Using RNAi targeted to different neurons, reduction of Indy expression in vesicular glutamate transporter (VGlut)-expressing neurons, but not other neurotransmitter-specific neurons, results in the bang-sensitive phenotype. Finer mapping of the Indy RNAi phenotypes has identified a very small group of neurons expressing the neuropeptide leucokinin (LK neurons) as a neural locus important for Indy-dependent seizure suppression. Involvement of the TCA cycle in seizure suppression in this and other diseases has been postulated.

A second Drosophila gene involved in citrate metabolism, kdn, also exhibits bang-sensitive phenotypes.

[updated Nov. 2021 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: developmental and epileptic encephalopathy
Symptoms and phenotype
Specific Disease Summary: developmental and epileptic encephalopathy 25, with amelogenesis imperfecta
OMIM report

[DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 25 WITH AMELOGENESIS IMPERFECTA; DEE25](https://omim.org/entry/615905)

Human gene(s) implicated

[SOLUTE CARRIER FAMILY 13 (SODIUM-DEPENDENT CITRATE TRANSPORTER), MEMBER 5; SLC13A5](https://omim.org/entry/608305)

Symptoms and phenotype

Developmental and epileptic encephalopathy-25 with amelogenesis imperfecta (DEE25) is an autosomal recessive neurologic disorder characterized by the onset of refractory seizures in early infancy. Most patients present with seizures in the neonatal period, which is often associated with status epilepticus. However, there is phenotypic variability, and some patients have onset of seizures later in infancy. Affected individuals show global developmental delay with intellectual disability and poor speech and communication. The seizures may remit somewhat with age, but there are persistent neurologic symptoms, including ataxia, spasticity, and abnormal involuntary movements. In addition to neurologic deficits, patients also have dental anomalies with amelogenesis imperfecta (summary by Thevenon et al., 2014, pubmed:24995870; Schossig et al., 2017, pubmed: 27600704). [from MIM:615905; 2021.11.09]

The disorder shows phenotypic similarities to Kohlschutter-Tonz syndrome. [from MIM:615905; 2021.11.09]

Genetics

Developmental and epileptic encephalopathy-25 with amelogenesis imperfecta (DEE25) is caused by homozygous or compound heterozygous mutation in the SLC13A5 gene. [from MIM:615905; 2021.11.09]

Cellular phenotype and pathology
Molecular information

SLC13A5 encodes a high-affinity sodium/citrate cotransporter that mediates citrate entry into cells. [Gene Cards, SLC13A5; 21.11.09]

External links
Disease synonyms
DEE25
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    Many to many: multiple related genes in both species.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      I'm not dead yet (Indy) encodes a plasma membrane transporter of Krebs cycle intermediates (citrate, succinate, fumarate, alpha-ketoglutarate) of the SLC13A family that is important in organismal intermediary metabolism. Mutations in Indy create a favorable metabolic state, similar to calorie restriction, and extend life span. [Date last reviewed: 2019-03-07]
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human SLC13A5, SLC13A2, and several other related gene in human (multiple related genes in both species). Dmel\Indy shares 38% identity and 58% similarity with SLC13A5.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (0 groups)
        Alleles Reported to Model Human Disease (Disease Ontology) (5 alleles)
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        References (5)