FB2026_02 , released June 18, 2026
Human Disease Model Report: developmental and epileptic encephalopathy 4
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General Information
Name
developmental and epileptic encephalopathy 4
FlyBase ID
FBhh0001610
Overview

This report describes developmental and epileptic encephalopathy 4, a subtype of evelopmental and epileptic encephalopathy. The human gene implicated is STXBP1, which encodes a syntaxin-binding protein. There is one high-scoring fly ortholog, Dmel\Rop, for which multiple genetic reagents, including amorphic alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated.

Wild-type Hsap\STXBP1 has been introduced into flies, but has not been used to model disease.

Pan-neuronal or dopaminergic neuron-specific RNAi knockdown of Dmel\Rop is lethal at larval or pupal stages; homozygous amorphic Dmel\Rop alleles also result in lethality. Flies heterozygous for amorphic Dmel\Rop alleles survive to adulthood and exhibit a 20% decrease of Rop protein in heads, similar to decreases of STXBP1 protein in haploinsufficient patient iPSC-derived neurons, and in the brains of heterozygous mice. Flies haploinsufficient for Dmel\Rop exhibit exacerbation of the phenotypes induced by expression of Hsap\SNCA, including enhancement of rough eye and locomotor phenotypes.

[updated Dec. 2024 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: developmental and epileptic encephalopathy
Symptoms and phenotype
Specific Disease Summary: developmental and epileptic encephalopathy 4
OMIM report

[DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 4; DEE4](https://omim.org/entry/612164)

Human gene(s) implicated

[SYNTAXIN-BINDING PROTEIN 1; STXBP1](https://omim.org/entry/602926)

Symptoms and phenotype

Developmental and epileptic encephalopathy-4 (DEE4) is a neurologic disorder characterized by the onset of tonic seizures in early infancy (usually in first months of life). In most cases, seizures increase in frequency and become refractory. Affected individuals have profoundly impaired psychomotor development with poor head control, limited or no ability to walk, spastic quadriplegia, and poor or absent speech. Brain imaging may show cortical atrophy and hypomyelination. EEG studies in the more severe cases show a burst-suppression pattern, consistent with a clinical diagnosis of Ohtahara syndrome, and/or hypsarrhythmia, consistent with a clinical diagnosis of West syndrome. Less severely affected individuals have later onset of seizures (summary by Saitsu et al., 2008, pubmed:18469812 ; Hamdan et al., 2009, pubmed:19557857). [from MIM:612164; 2024.12.03]

Genetics

Developmental and epileptic encephalopathy-4 (DEE4) is caused by heterozygous mutation in the STXBP1 gene on chromosome 9q34. One family has been reported with a homozygous mutation in the STXBP1 gene. [from MIM:612164; 2024.12.03]

Cellular phenotype and pathology
Molecular information

STXBP1 encodes a syntaxin-binding protein. The encoded protein appears to play a role in release of neurotransmitters via regulation of syntaxin, a transmembrane attachment protein receptor. [provided by RefSeq, Feb 2010]

External links
Disease synonyms
DEE4
early-infantile epileptic encephalopathy 4
EIEE4
STXBP1-DEE
STXBP1 encephalopathy
STXBP1 encephalopathy with epilepsy
STXBP1 epileptic encephalopathy
STXBP1-related developmental and epileptic encephalopathy
STXBP1-related early-onset encephalopathy
STXBP1-related epileptic encephalopathy
syntaxin binding protein 1 encephalopathy with epilepsy
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one (many human to 1 Drosophila); STXBP1 has one low-scoring Drosophila ortholog, Rop.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Molecular function (GO)
    Gene Groups / Pathways
    Comments on ortholog(s)

    High-scoring ortholog of human STXBP1, moderate scoring ortholog of STXBP2 and STXBP3 (1 Drosophila to many human).

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (14 groups)
      protein-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, Identification by mass spectrometry
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      anti tag coimmunoprecipitation, anti tag western blot, Identification by mass spectrometry
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      experimental knowledge based
      anti bait coimmunoprecipitation, western blot
      anti bait coimmunoprecipitation, western blot
      anti tag coimmunoprecipitation, Identification by mass spectrometry
      experimental knowledge based
      pull down, molecular weight estimation by staining
      Alleles Reported to Model Human Disease (Disease Ontology) (8 alleles)
      Models Based on Experimental Evidence ( 6 )
      Modifiers Based on Experimental Evidence ( 5 )
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      References (4)