Please see the JBrowse view of Dmel\Alas for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.43
Gene model reviewed during 5.52
There is only one protein coding transcript and one polypeptide associated with this gene
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Alas using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: 0-3 hr AEL
Comment: 12-24 hr AEL
Maternally contributed Alas transcript is present in embryos through syncytial blastoderm stage. Zygotic Alas transcript is undetectable via in situ until embryonic stage 14, when it begins to be expressed in a set of cells coinciding with oenocyte markers in in the distal part of each abdominal segment; and in two symmetrical groups of cells at the anterior of the embryo that coincide with markers for the Bolwig organ primordium.
JBrowse - Visual display of RNA-Seq signals
View Dmel\Alas in JBrowse2-105
2-109.8
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
Source for identity of: Alas CG3017