FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Gene: Dmel\ITP
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General Information
Symbol
Dmel\ITP
Species
D. melanogaster
Name
Ion transport peptide
Annotation Symbol
CG13586
Feature Type
FlyBase ID
FBgn0035023
Gene Model Status
Stock Availability
Gene Summary
Ion transport peptide (ITP) encodes three identified alternative splice-forms of neuropeptides, one short and two longer forms. The short isoform is produced in several neurosecretory neurons and interneurons in the CNS controling the evening peak of locomotor activity of the fly. [Date last reviewed: 2019-03-07] (FlyBase Gene Snapshot)
Also Known As

DrmITP, DrmITPL1, DrmITPL2

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
2-107
RefSeq locus
NT_033778 REGION:24537421..24558961
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (14 terms)
Molecular Function (2 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
non-traceable author statement
non-traceable author statement
inferred from electronic annotation with InterPro:IPR001166, InterPro:IPR018251
Biological Process (10 terms)
Terms Based on Experimental Evidence (10 terms)
CV Term
Evidence
References
involved_in circadian rhythm
inferred from expression pattern
inferred from genetic interaction with FLYBASE:Pdf; FB:FBgn0023178
involved_in drinking behavior
inferred from mutant phenotype
involved_in locomotor rhythm
inferred from mutant phenotype
inferred from expression pattern
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
involved_in circadian rhythm
inferred from biological aspect of ancestor with PANTHER:PTN002186303
non-traceable author statement
Cellular Component (2 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
inferred from sequence model
Gene Group (FlyBase)
Protein Family (UniProt)
-
Summaries
Gene Snapshot
Ion transport peptide (ITP) encodes three identified alternative splice-forms of neuropeptides, one short and two longer forms. The short isoform is produced in several neurosecretory neurons and interneurons in the CNS controling the evening peak of locomotor activity of the fly. [Date last reviewed: 2019-03-07]
Gene Group (FlyBase)
NEUROPEPTIDES -
Neuropeptides are secreted into the extracellular space where they interact with cell surface receptors (usually G protein coupled receptors). They are extremely diverse, acting as neurotransmitters, neuromodulators, hormones or growth factors. (Adapted from FBrf0211443 and PMID:27813667).
Summary (Interactive Fly)

an endocrine regulator of thirst and excretion, which integrates water homeostasis with feeding - regulates sleep through the photoperiod network - expressed in pars lateralis neurosecretory neurons, three hindgut-innervating neurons in abdominal ganglia, and a stage-specific number of interneurons and peripheral bipolar neurons

Gene Model and Products
Number of Transcripts
5
Number of Unique Polypeptides
3

Please see the JBrowse view of Dmel\ITP for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry Q0E8W5)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.52

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0290218
1771
119
FBtr0290219
3646
119
FBtr0300186
2230
108
FBtr0300187
1531
119
FBtr0343483
974
119
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0288657
14.1
119
8.07
FBpp0288658
13.9
119
8.30
FBpp0289423
12.9
108
8.06
FBpp0289424
13.9
119
8.30
FBpp0310091
13.9
119
8.30
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

119 aa isoforms: ITP-PD, ITP-PF, ITP-PG
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\ITP using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-1.33

Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
RNA-seq
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

ITP is expressed in the embryonic midline in anterior midline glial cells but not posterior midline glial cells.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
distribution deduced from reporter (Gal4 UAS)
Stage
Tissue/Position (including subcellular localization)
Reference
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

ITP-protein is expressed in adult pacemaker neurons LNd and Pdf negative s-LNV neuron. Labeling in the cell body is detected throughout the circadian light-/dark-cycle while staining at the axon terminals is strongest at Zeitgeber time 5, 8 and 20.

ITP labels the projection of the fifth Pdf-negative s-LNv neuron to the medulla and lamina. The terminals in the lamina are near the retina, in the region of the lamina monopolar cells. In addition, there is more widespread staining of the medulla.

ITP is co-expressed with a dimm reporter and the Kurs-6 enhancer trap in ipc-1 and ipc-2a neurons.

ITP protein is expressed in the 5th PDF negative s-LNV neuron and in one of the neurons of the LNd cluster. This LNd neuron also expresses ScerGAL4npf.4.5 (only in males) and ScerGAL4Mai179.

There are a maximum of 9 (but normally 8) ITP immunoreactive bilateral neuron pairs in the larval and prepupal central nervous system which are found in dorso-mediolateral positions close to the posterior edges of the calyces of the mushroom body. These neurons, referred to as the ipc-1 neurons, project their axons ipsilaterally to terminate posterior to the ring gland, branch within the corpa cardiaca and terminate on the walls of the anterior aorta. Dendrites emerge medially almost at right angles from the axons and extend in a posterioventral direction and, upon reaching the midline, these fibres continue caudally to terminate in the subesophageal ganglion. One fibre on each side continues without branching through the prothoracic gland and terminate in the corpa allatum. In the adults, there are a maximum of 14 ITP immunoreactive neurons in the protocerebrum. The four pairs of adult ipc-1 neurons are located in a posteriodorsal and mediolateral position within the protocerebrum. They project axons to the retrocerebral complex and other putative neurohemal areas in the dorsal sheaths of the neck connective and thoracic parts of the ventral nerve cord. These neurons also give off side branches that innervate median neuropils surrounding the esophageal orifice. The main axon bundle ipsilaterally joins the nervus corporis cardiaci. Some branches of the main axons continue to make terminals at the dorsal surface of the thoracic ganglia or run within lateral stomatogastric nerves along the proventriculus, continue along thoracic parts of the gut and terminate in the vicinity of the salivary glands. Three other groups of protocerebral neurons are ITP immunoreactive: four ipc-2 neurons, which are found dorso-posteriomedially, give rise to short fibres that cross the midline at the level of the protocerebral bridge, with two fibres running dorsally and caudally to intertwine with the ipc-1 neurons; three to four pairs of ipc-3 extending processes through the superior medial and lateral protocerebrum. Their cell bodies are located close to the anterior lateral and anterior dorsal bases of the medulla. At least the most anteriorly and ventrally positioned neuron projects lateral branches into the accessory medulla; one bilateral, faintly staining ITP immunopositive pair of neurons, called the ipc-4, are found in a dorsomedial position with short projections into protocerebral bridge associated neuropils. These neurites extend along the median bundle to areas around the esophageal orifice. In the ventromedial area of the larval and prepupal subesophageal ganglion, a prominent pair of ITP immunoreactive neurons are found that send projections running to the dorsal side and span almost the entire ventral nerve cord. These neurons lose their immunoreactivity during the pupal stage. Located in the eighth abdominal neuromere, three or four pairs of ITP immunoreactive neurons are seen in larvae, prepupae and adults. The axons of these cells extend first into the medial neuropils and then leave the ventral nerve cord through the eighth abdominal nerve and probably innervate the hindgut. Along the lateral body wall, next to the border of abdominal segments A7 and A8, a pair of bipolar peripheral ITP immunopositive neurons can be seen in larvae and prepupae. In adults, this neuron is located on the dorsal perineural side and close to the roots of the dorsal lateral wing and haltere nerves. This neuron sends one branchless axon along the nerves into the periphery and one axon back into the thoracoabdominal ganglion mass where they branch and terminate in the dorsal perineural sheath.

Marker for
 
Subcellular Localization
CV Term
Evidence
References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\ITP in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 14 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 14 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of ITP
Transgenic constructs containing regulatory region of ITP
Aberrations (Deficiencies and Duplications) ( 1 )
Inferred from experimentation ( 1 )
Gene partially disrupted in
Inferred from location ( 9 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (0)
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (0)
Mus musculus (laboratory mouse) (0)
Xenopus tropicalis (Western clawed frog) (0)
Danio rerio (Zebrafish) (0)
Caenorhabditis elegans (Nematode, roundworm) (3)
2 of 14
Yes
Yes
2 of 14
Yes
Yes
1 of 14
No
Yes
Anopheles gambiae (African malaria mosquito) (1)
12 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (0)
Saccharomyces cerevisiae (Brewer's yeast) (0)
Schizosaccharomyces pombe (Fission yeast) (0)
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:ITP. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 3 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Functional Complementation Data
    Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
    Interactions
    Summary of Physical Interactions
    Interaction Browsers
    Summary of Genetic Interactions
    Interaction Browsers

    Please look at the allele data for full details of the genetic interactions
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    External Data
    Linkouts
    DroID - A comprehensive database of gene and protein interactions.
    Pathways
    Signaling Pathways (FlyBase)
    Metabolic Pathways
    FlyBase
    External Links
    External Data
    Linkouts
    Class of Gene
    Genomic Location and Detailed Mapping Data
    Chromosome (arm)
    2R
    Recombination map
    2-107
    Cytogenetic map
    Sequence location
    FlyBase Computed Cytological Location
    Cytogenetic map
    Evidence for location
    60D4-60D5
    Limits computationally determined from genome sequence between P{PZ}bs03267&P{lacW}l(2)k10502k10502 and P{lacW}Nurf-38k16102
    Experimentally Determined Cytological Location
    Cytogenetic map
    Notes
    References
    Experimentally Determined Recombination Data
    Location
    Left of (cM)
    Right of (cM)
    Notes
    Stocks and Reagents
    Stocks (13)
    Genomic Clones (19)
    cDNA Clones (34)
     

    Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

    cDNA clones, fully sequenced
    BDGP DGC clones
    Other clones
      Drosophila Genomics Resource Center cDNA clones

      For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

      cDNA Clones, End Sequenced (ESTs)
      BDGP DGC clones
        RNAi and Array Information
        Linkouts
        DRSC - Results frm RNAi screens
        Antibody Information
        Laboratory Generated Antibodies
        Commercially Available Antibodies
         
        Cell Line Information
        Publicly Available Cell Lines
         
          Other Stable Cell Lines
           
            Other Comments
            Relationship to Other Genes
            Source for database merge of

            Source for merge of: CG13586 BcDNA:SD05282

            Additional comments

            Source for merge of CG13586 BcDNA:SD05282 was a shared cDNA ( date:020730 ).

            Nomenclature History
            Source for database identify of

            Source for identity of: itp CG13586

            Source for identity of: ITP itp

            Nomenclature comments
            Etymology
            Synonyms and Secondary IDs (15)
            Reported As
            Symbol Synonym
            BcDNA:SD05282
            Drm-ITP
            Secondary FlyBase IDs
            • FBgn0046758
            Datasets (0)
            Study focus (0)
            Experimental Role
            Project
            Project Type
            Title
            Study result (0)
            Result
            Result Type
            Title
            External Crossreferences and Linkouts ( 52 )
            Sequence Crossreferences
            NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
            GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
            GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
            UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
            Other crossreferences
            AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
            BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
            DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
            EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
            FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
            FlyMine - An integrated database for Drosophila genomics
            KEGG Genes - Molecular building blocks of life in the genomic space.
            MARRVEL_MODEL - MARRVEL (model organism gene)
            Linkouts
            Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
            DroID - A comprehensive database of gene and protein interactions.
            DRSC - Results frm RNAi screens
            Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
            FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
            FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
            Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
            Flygut - An atlas of the Drosophila adult midgut
            iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
            Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
            References (112)