FlyBase Gene Report: Dmel\ATPsynF

General Information

Symbol

Dmel\ATPsynF

Species

D. melanogaster

Name

ATP synthase, subunit F

Annotation Symbol

CG4692

Feature Type

protein_coding_gene

FlyBase ID

FBgn0035032

Gene Model Status

Current

Stock Availability

4 publicly available

Gene Summary

Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the membrane (By similarity). (UniProt, Q9W141)

Contribute a Gene Snapshot for this gene.

All Summaries

Alliance
Auto summary
Gene Group
UniProtKB
Interactive Fly

Key Links

Genomic Location

Cytogenetic map

60D9-60D9

Sequence location

2R:24,599,088..24,599,821 [-]

Recombination map

2-107

RefSeq locus

NT_033778 REGION:24599088..24599821

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (6 terms)

Molecular Function (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

contributes_to proton-transporting ATP synthase activity, rotational mechanism

inferred from sequence or structural similarity with UniProtKB:P56134

(FlyBase Curators, 2008--)

inferred from biological aspect of ancestor with PANTHER:PTN000317570

(assigned by GO_Central )

(Gaudet et al., 2011)

Biological Process (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

involved_in mitochondrial ATP synthesis coupled proton transport

inferred from biological aspect of ancestor with PANTHER:PTN000317570

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in proton transmembrane transport

inferred from sequence or structural similarity with UniProtKB:P56134

(Sardiello et al., 2003.6.11)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

located_in mitochondrion

inferred from high throughput direct assay

(Tan et al., 2009)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

part_of mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

inferred from sequence or structural similarity with UniProtKB:D3ZAF6

(FlyBase Curators, 2008--)

part_of mitochondrial proton-transporting ATP synthase complex

inferred from biological aspect of ancestor with PANTHER:PTN000317570

(assigned by GO_Central )

(Gaudet et al., 2011)

Gene Group (FlyBase)

MITOCHONDRIAL COMPLEX V - F0 SUBUNITS

Protein Family (UniProt)

Belongs to the ATPase F chain family. (Q9W141)

Protein Signatures (InterPro)

Mitochondrial F1-F0 ATP synthase subunit F, predicted

Summaries

Gene Group (FlyBase)

MITOCHONDRIAL COMPLEX V - F0 SUBUNITS -: Mitochondrial ATP synthase (Complex V) synthesizes ATP from ADP and inorganic phosphate using the energy provided by the proton electrochemical gradient across the inner mitochondrial membrane. It consists of two structural domains: the F₁ sector, a soluble portion situated in the mitochondrial matrix, and the F₀ sector, which spans the inner mitochondrial membrane. The F₀ sector consists of an integral membrane proton-conducting channel and a peripheral stalk domain. (Adapted from PMID:21874297).

Protein Function (UniProtKB)

(UniProt, Q9W141)

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\ATPsynF for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.52

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

ATPsynF-RA

FBtr0072340

NM_166678

591

107

ATPsynF-RB

FBtr0072339

NM_138096

548

107

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

ATPsynF-PA

FBpp0072247

12.5

107

10.56

NP_726463

AAM68322

ATPsynF-PB

FBpp0072246

12.5

107

10.56

NP_611940

AAF47236

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

107 aa isoforms: ATPsynF-PA, ATPsynF-PB

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Subunit Structure (UniProtKB)

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(0) seems to have nine subunits: a, b, c, d, e, f, g, F6 and 8 (or A6L) (By similarity).

(UniProt, Q9W141)

Crossreferences

InterPro - A database of protein families, domains and functional sites

Mitochondrial F1-F0 ATP synthase subunit F, predicted

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Q9W141

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\ATPsynF using the Feature Mapper tool.

External Data

Crossreferences

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

organism

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

organism

(Fisher et al., 2012)

embryonic stage 7 -- 8

anterior endoderm anlage

(Fisher et al., 2012)

head mesoderm

(Fisher et al., 2012)

hindgut anlage

(Fisher et al., 2012)

organism | ubiquitous

(Fisher et al., 2012)

posterior endoderm

(Fisher et al., 2012)

trunk mesoderm

(Fisher et al., 2012)

embryonic stage 9 -- 10

anterior endoderm

(Fisher et al., 2012)

head mesoderm

(Fisher et al., 2012)

inclusive hindgut primordium

(Fisher et al., 2012)

organism | ubiquitous

(Fisher et al., 2012)

posterior endoderm

(Fisher et al., 2012)

trunk mesoderm

(Fisher et al., 2012)

embryonic stage 11 -- 12

anterior midgut primordium

(Fisher et al., 2012)

head mesoderm

(Fisher et al., 2012)

hindgut proper primordium

(Fisher et al., 2012)

Malpighian tubule main body primordium

(Fisher et al., 2012)

Malpighian tubule primordium

(Fisher et al., 2012)

posterior midgut primordium

(Fisher et al., 2012)

trunk mesoderm

(Fisher et al., 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

day 5 of adulthood & male -- day 7 of adulthood & male

spermatozoon

(Wasbrough et al., 2010, Dorus et al., 2006)

day 7 of adulthood -- day 49 of adulthood

adult heart

(Cammarato et al., 2011)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in mitochondrion

inferred from high throughput direct assay

(Tan et al., 2009)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\ATPsynF in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\ATPsynF

View exonic expression by tissue for Dmel\ATPsynF

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0035032

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0035032

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG4692-RB

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG4692

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\ATPsynF

Stages(s) 1-3
Stages(s) 4-6
Stages(s) 7-8
Stages(s) 9-10
Stages(s) 11-12
Stages(s) 13-16

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 1 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 5 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of ATPsynF

Transgenic constructs containing regulatory region of ATPsynF

Aberrations (Deficiencies and Duplications) ( 0 )

Inferred from experimentation ( 0 )

Inferred from location ( 0 )

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal - all die during P-stage, with Scer\GAL4^Mef2.PR

ATPsynF^GD4550

viable, with Scer\GAL4^pnr-MD237

ATPsynF^GD4550

viable, with Scer\GAL4^tin.CΔ4

ATPsynF^GD4550

Other Phenotypes

Allele

visible, with Scer\GAL4^pnr-MD237

ATPsynF^GD4550

Phenotype manifest in

Allele

chaeta, with Scer\GAL4^pnr-MD237

ATPsynF^GD4550

trichogen cell, with Scer\GAL4^pnr-MD237

ATPsynF^GD4550

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (3)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\ATP5MF

12 of 15

Yes

Hsap\C17orf80

1 of 15

Yes

Hsap\PTCD1

1 of 15

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (2)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Atp5j2

12 of 15

Yes

Mmus\D11Wsu47e

1 of 15

Yes

Rattus norvegicus (Norway rat) (3)

Rnor\Atp5mf

10 of 13

Yes

Rnor\LOC689271

1 of 13

Yes

Rnor\MGC95210

1 of 13

Yes

Xenopus tropicalis (Western clawed frog) (2)

Xtro\atp5mf

7 of 12

Yes

Xtro\c17orf80

1 of 12

Yes

Danio rerio (Zebrafish) (2)

Drer\atp5mf

12 of 15

Yes

Drer\si:dkey-21c1.4

7 of 15

Yes

Caenorhabditis elegans (Nematode, roundworm) (1)

Cele\R53.4

9 of 15

Yes

Arabidopsis thaliana (thale-cress) (0)

No records found.

Saccharomyces cerevisiae (Brewer's yeast) (0)

No records found.

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG09190ITX )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA18359

Drosophila persimilis

Dper\GL10106

Drosophila willistoni

Dwil\GK19670

Drosophila virilis

Dvir\GJ22112

Drosophila mojavensis

Dmoj\GI20386

Drosophila grimshawi

Dgri\GH21887

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG09150FGB )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17006151

Musca domestica

House fly

Mdoa\17026481

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_08326

Mayetiola destructor

Hessian fly

Mdes\Mdes008067

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL011010

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL005620

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL010754

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL002897

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL012454

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL000877

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL004670

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL000740

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL014532

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL014681

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL001718

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL011110

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL011437

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL000619

Anopheles darlingi

American malaria mosquito

Adar\ADAC002585

Anopheles gambiae

Malaria mosquito

Agam\AGAP012515

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ004713

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W0JS6 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA005648

Danaus plexippus

Monarch butterfly

Dple\DPOGS200355-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL000029

Apis florea

Little honeybee

Aflo\5121249716

Apis mellifera

Western honey bee

Amel\LOC409930

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP14661

Bombus terrestris

Buff-tailed bumblebee

Bter\15209762

Linepithema humile

Argentine ant

Lhum\LH23167

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:001a50

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG020887

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_08550

Tribolium castaneum

Red flour beetle

Tcas\Atp5j2

Pediculus humanus

Human body louse

Phum\PHUM082940

Rhodnius prolixus

Kissing bug

Rpro\RPRC005989

Cimex lectularius

Bed bug

Clec\CLEC000486

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI22855

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI000075

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_07416

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X0JXG )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR015053

Ixodes scapularis

Black-legged tick

Isca\ISCW016254

Stegodyphus mimosarum

African social velvet spider

Smim\KFM71570.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur12g03810

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G12MW )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Ciona intestinalis

Vase tunicate

Cint\ENSCING00000015381

Gallus gallus

Domestic chicken

Ggal\ENSGALG00000004439

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (0)

No records found.

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

ATP5MF; ATP synthase membrane subunit f

12 of 15

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

RNA-protein

Physical Interaction

Assay

References

ATPsynF - SmB

anti bait coimmunoprecipitation, quantitative reverse transcription pcr

(Lu et al., 2014)

ATPsynF - SmD1

anti tag coimmunoprecipitation, quantitative reverse transcription pcr

(Lu et al., 2014)

ATPsynF - smg

anti bait coimmunoprecipitation, primer specific pcr

(Chartier et al., 2015)

protein-protein

Physical Interaction

Assay

References

ATPsynF - ATPsynB

experimental knowledge based, blue native page, peptide massfingerprinting

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - ATPsynCF6

experimental knowledge based, blue native page, peptide massfingerprinting

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - ATPsynD

blue native page, peptide massfingerprinting, experimental knowledge based

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - ATPsynE

blue native page, peptide massfingerprinting, experimental knowledge based

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - ATPsynG

experimental knowledge based, blue native page, peptide massfingerprinting

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - ATPsynO

experimental knowledge based, blue native page, peptide massfingerprinting

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - ATPsynβ

blue native page, peptide massfingerprinting

(Rahman et al., 2014)

ATPsynF - ATPsynγ

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - ATPsynδ

experimental knowledge based, blue native page, peptide massfingerprinting

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - CG10425

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - CG12170

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - COX4

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - COX5A

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Cpr78E

blue native page, peptide massfingerprinting

(Rahman et al., 2014)

ATPsynF - Cyt-c1

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Gdh

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Gpdh1

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Mf

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Mhc

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Mlc2

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Ost48

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Rtnl1

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - Tm2

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - blw

experimental knowledge based, blue native page, peptide massfingerprinting

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - mAcon1

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - pippin

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - porin

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - sun

blue native page, peptide massfingerprinting, experimental knowledge based

(Rahman et al., 2014, Guruharsha et al., 2011)

ATPsynF - up

experimental knowledge based

(Guruharsha et al., 2011)

ATPsynF - wupA

experimental knowledge based

(Guruharsha et al., 2011)

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Subunit Structure (UniProtKB)

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(0) seems to have nine subunits: a, b, c, d, e, f, g, F6 and 8 (or A6L) (By similarity).

(UniProt, Q9W141 )

Linkouts

BioGRID - A database of protein and genetic interactions.

63503

DroID - A comprehensive database of gene and protein interactions.

FBgn0035032

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

37931

MIST (protein-protein) - An integrated Molecular Interaction Database

ATPsynF

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-107

Cytogenetic map

60D9-60D9

Sequence location

2R:24,599,088..24,599,821 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

60D9-60D9

Limits computationally determined from genome sequence between P{lacW}Nurf-38^k16102 and P{lacW}Mmp1^k04809

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

60D8-60D8

(determined by in situ hybridisation)

(Wang et al., 2002)

Experimentally Determined Recombination Data

Location

2-107

(FlyBase, 2016)

2-111.0

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (4)

Bloomington

15256

y¹; P{SUPor-P}ATPsynF^KG10348/CyO; ry⁵⁰⁶

VDRC

v109985

P{KK115242}VIE-260B

v13324

w¹¹¹⁸; P{GD4550}v13324

v342217

P{hsFLP}1, y¹ w¹¹¹⁸; P{HD_CFD01813}attP40/CyO-GFP

Genomic Clones (16)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (172)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0035032

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0035032

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

37931

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: ATPsynF CG4692

(Porcelli and Marygold, 2014.9.16)

Source for database merge of

Source for merge of: CG4692 anon- EST:Posey45

(Bayraktaroglu, 2000.11.2)

Additional comments

Other Comments

Area matching Drosophila ESTs AI063979 and AA802032.

(Davies, 2001.3.15)

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 43 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

37931

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information