FlyBase Aberration Report: Dmel\Df(2R)BSC298

General Information

Symbol

Df(2R)BSC298

Species

D. melanogaster

Name

FlyBase ID

FBab0044959

Feature type

chromosomal_deletion

Computed Breakpoints include

[46B2-46B2];[46C7-46C7];

Features within 46B2--46C7

Genomic Maps

JBrowse

Sequence coordinates

2R:9,734,274..9,734,274 (Df(2R)BSC298:bk1)

(Bloomington Drosophila Stock Center, 2008.8.7)

2R:9,958,120..9,958,120 (Df(2R)BSC298:bk2)

(Bloomington Drosophila Stock Center, 2008.8.7)

Member of large scale dataset(s)

Dfs_BSC_set2

A set of ~800 largely isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Designed to fill gaps in deletion coverage and breakpoint placement; also used to replace older available deficiencies that have not been molecularly mapped.

(Cook et al., 2012)

Nature of Aberration

Cytological Order

Progenitor

PBac{WH}sqa^f00802

(Christensen and Cook, 2007.5.8)

P{XP}Mef2^d07371

(Christensen and Cook, 2007.5.8)

Mutagen

FLPase

(Christensen and Cook, 2007.5.8)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Christensen and Cook, 2007.5.8)

Breakpoints

46B2;46C7

(FlyBase Curators, 2008)

Causes alleles

Carries alleles

Transposon Insertions

P+PBac{XP5.WH5}BSC298

(Christensen and Cook, 2007.5.8)

Formalized genetic data

Genetic mapping information

Comments

Breakpoint from FlyBase's release 5 sequence location of progenitor insertion.

(Bloomington Drosophila Stock Center, 2008.8.7)

Comments on Cytology

The cytological breakpoints of Df(2R)BSC298 predicted from the Release 5 genomic coordinates of the progenitor PBac{WH}CG1776^f00802 and P{XP}Mef2^d07371 transposable element insertions sites are 46B2;46C7.

(Christensen and Cook, 2007.5.8)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Etf-QO

(Kahsai and Cook, 2018)

l(2)46Cb

(Kahsai and Cook, 2018)

l(2)k07803

(Kahsai et al., 2016)

Mef2

(Christensen and Cook, 2007.5.8)

peo

(Cenci et al., 2015)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

l(2)46Cd

(Kahsai and Cook, 2018)

l(2)46Dc

(Kahsai and Cook, 2018)

l(2)46Dd

(Kahsai and Cook, 2018)

l(2)46De

(Kahsai and Cook, 2018)

l(2)46Df

(Kahsai and Cook, 2018)

TER94

(Kahsai and Cook, 2018)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (42)

Related Comments

Phenotypic Data

In combination with other aberrations

Lethal in combination with Df(2R)BSC133.

(Kahsai et al., 2016)

Inferred to overlap with: Df(2R)BSC131.

(Christensen and Cook, 2007.5.8)

Inferred to overlap with: Df(2R)BSC133.

(Christensen and Cook, 2007.5.8)

NOT in combination with other aberrations

Stocks (1)

Bloomington

23682

w¹¹¹⁸; Df(2R)BSC298/CyO

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

The presence of P+PBac{XP5.WH5}BSC298 was verified using the PCR methods and primers described in FBrf0175003.

(Christensen and Cook, 2007.5.8)

Synonyms and Secondary IDs (1)

Reported As

Symbol Synonym

Df(2R)BSC298

(Cacciottolo and Cauchi, 2025, Candia et al., 2023, Li et al., 2020, Sawyer et al., 2020, Kahsai and Cook, 2018, Kahsai et al., 2016, Cenci et al., 2015, Galindo et al., 2014, Moustaqim-Barrette et al., 2014, Cook et al., 2012, FlyBase Curators, 2008, Christensen and Cook, 2007.5.8, FlyBase, 2007)

Name Synonyms

Secondary FlyBase IDs

References (16)

Report Sections

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