TepIII, dTEPIII
Please see the JBrowse view of Dmel\Tep3 for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
GC splice donor site postulated
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.52
There is only one protein coding transcript and one polypeptide associated with this gene
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Tep3 using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Tep3 expression is detected in plasmatocytes in larvae. In adults it is observed in the crop epithelium and in the epidermis underlying the cuticle in the abodomen but only on the ventral side.
JBrowse - Visual display of RNA-Seq signals
View Dmel\Tep3 in JBrowse
2-28
2-25.0
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Staphylococcus aureus compared to untreated cells. However, the dsRNA treatment does not affect phagocytosis of Candida albicans or Escherichia coli.
Identified as a gene with significant level of mRNA cycling as assessed by expression analysis using high density oligonucleotide arrays with probe generated from adult heads harvested over six time points over the course of a day. Shows alteration in expression in a Clk mutant background.
Source for merge of: TepIII CG7068
Source for merge of TepIII CG7068 was sequence comparison ( date:000423 ).
Source for identity of: Tep3 TepIII