FlyBase Gene Report: Dmel\Gγ30A

General Information

Symbol

Dmel\Gγ30A

Species

D. melanogaster

Name

G protein gamma subunit 30A

Annotation Symbol

CG3694

Feature Type

protein_coding_gene

FlyBase ID

FBgn0267252

Gene Model Status

Current

Stock Availability

64 publicly available

Gene Summary

G protein subunit γ at 30A (Gγ30A) encodes the γ subunit of a heterotrimeric G protein complex. It functions in rhodopsin-mediated signaling in photoreceptor cells. Post-translational farnesylation of the product of Gγ30A facilitates membrane attachment of the visual Gβ/γ complex. [Date last reviewed: 2019-03-07] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Gene Group
UniProtKB
Interactive Fly

Also Known As

Gγ, G protein γ30A, Gγe, Gγ_e, lincRNA.S701

Key Links

Genomic Location

Cytogenetic map

30A7-30A8

Sequence location

2L:9,256,563..9,302,494 [+]

Recombination map

2-35

RefSeq locus

NT_033779 REGION:9256563..9302494

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (10 terms)

Molecular Function (2 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

enables protein heterodimerization activity

inferred from physical interaction with FLYBASE:Gβ76C; FB:FBgn0004623

(Schulz et al., 1999)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

enables G-protein beta-subunit binding

inferred from electronic annotation with InterPro:IPR001770, InterPro:IPR039227

(InterPro Project Members, 2004-)

inferred from biological aspect of ancestor with PANTHER:PTN001041262

(GO Reference Genome Project, 2011-)

Biological Process (5 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

involved_in cellular response to carbon dioxide

inferred from mutant phenotype

(Yao and Carlson, 2010)

involved_in G protein-coupled receptor signaling pathway

inferred from direct assay

(Schulz et al., 1999)

involved_in phototransduction

inferred from physical interaction with FLYBASE:Gβ76C; FB:FBgn0004623

(Schulz et al., 1999)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

involved_in G protein-coupled receptor signaling pathway

inferred from biological aspect of ancestor with PANTHER:PTN001041262

(GO Reference Genome Project, 2011-)

inferred from electronic annotation with InterPro:IPR001770, InterPro:IPR015898, InterPro:IPR036284

(InterPro Project Members, 2004-)

involved_in phospholipase C-activating G protein-coupled receptor signaling pathway

inferred from electronic annotation with InterPro:IPR039227

(InterPro Project Members, 2004-)

involved_in sensory perception of taste

inferred from electronic annotation with InterPro:IPR039227

(InterPro Project Members, 2004-)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

located_in cytoplasm

inferred from direct assay

(Schulz et al., 1999)

part_of heterotrimeric G-protein complex

inferred from physical interaction with FLYBASE:Gβ76C; FB:FBgn0004623

(Schulz et al., 1999)

located_in rhabdomere

inferred from direct assay

(Schulz et al., 1999)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

part_of heterotrimeric G-protein complex

inferred from electronic annotation with InterPro:IPR001770, InterPro:IPR039227

(InterPro Project Members, 2004-)

inferred from biological aspect of ancestor with PANTHER:PTN001041262

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

HETEROTRIMERIC G-PROTEIN GAMMA SUBUNITS

Protein Family (UniProt)

Belongs to the G protein gamma family. (Q9NFZ3)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

Gene Group (FlyBase)

HETEROTRIMERIC G-PROTEIN GAMMA SUBUNITS -: The Heterotrimeric G-protein gamma subunits (Gγ) associate with Gβ (Gβγ) to form a functional heterodimer. When Gα is bound to GDP, Gβγ associates with Gα to form an heterotrimer (Gαβγ), which prevents Gβγ from activating its effectors. (Adapted from FBrf0209904 and FBrf0183798).

Protein Function (UniProtKB)

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. This subunit functions in visual transduction in the compound eye.

(UniProt, Q9NFZ3)

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\Gγ30A for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q9NFZ3)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.56

Stop-codon suppression (UAA) postulated; FBrf0216884.

Gene model reviewed during 5.44

Gene model reviewed during 5.40

Gene model reviewed during 5.45

Gene model reviewed during 5.48

Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated

Annotated transcripts do not represent all supported alternative splices within 5' UTR.

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

FBtr0079795

2799

FBtr0079796

1019

FBtr0079797

12225

FBtr0303895

1451

FBtr0309247

1470

FBtr0330019

4742

FBtr0336620

849

FBtr0346282

2995

238

Additional Transcript Data and Comments

Reported size (kB)

6, 1.8, 1.4 (northern blot)

(Schulz et al., 1999)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

Gγ30A-PA

FBpp0079395

8.4

6.69

FBpp0079396

8.4

6.69

FBpp0079397

8.4

6.69

FBpp0292898

8.4

6.69

FBpp0301186

8.4

6.69

FBpp0303053

8.4

6.69

FBpp0307603

7.5

8.49

FBpp0312039

28.3

238

9.28

X2JDM7

NP_001285776

AHN54290

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

72 aa isoforms: Gγ30A-PA, Gγ30A-PB, Gγ30A-PC, Gγ30A-PF, Gγ30A-PG, Gγ30A-PH

Additional Polypeptide Data and Comments

Reported size (kDa)

72 (aa); 8 (kD observed); 8 (kD predicted)

(Schulz et al., 1999)

Comments

Gβ76C protein, Gα49B protein, and Gγ30A protein are all expressed in the same pattern supporting the hypothesis that Gγ30A is part of a heterotrimeric eye-specific G protein.

(Schulz et al., 1999)

External Data

Subunit Structure (UniProtKB)

G proteins are composed of 3 units, alpha, beta and gamma. Interacts with Gbeta76C/Guanine nucleotide-binding protein subunit beta-2 (By similarity).

(UniProt, Q9NFZ3)

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Gγ30A using the Feature Mapper tool.

External Data

Crossreferences

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.67

Transcript Expression

expression microarray

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

eye

(Xu et al., 2004)

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

head

(Schulz et al., 1999)

RT-PCR

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

(Boto et al., 2010)

third segment of antenna

(Boto et al., 2010)

maxillary palp

(Boto et al., 2010)

Additional Descriptive Data

RT-PCR analysis shows that the transcripts -Ra, -RB, and -RC of Gγ30A are expressed in the adult head, third segment of the antenna and maxillary palps.

(Boto et al., 2010)

Eye-enriched transcripts determined by ratio of expression level in wild-type heads. versus expression level in so heads.

(Xu et al., 2004)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

immunolocalization

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

medulla

(Schulz et al., 1999)

lamina

(Schulz et al., 1999)

photoreceptor neuron

(Schulz et al., 1999)

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Gγ30A protein is localized to the photoreceptor cells of the retina. It is also detected in the lamina and the medulla, presumably in axons of the photoreceptor cells that project to these optic ganglia.

(Schulz et al., 1999)

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in cytoplasm

inferred from direct assay

(Schulz et al., 1999)

part_of heterotrimeric G-protein complex

inferred from physical interaction with FLYBASE:Gβ76C; FB:FBgn0004623

(Schulz et al., 1999)

located_in rhabdomere

inferred from direct assay

(Schulz et al., 1999)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Gγ30A in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Gγ30A

View exonic expression by tissue for Dmel\Gγ30A

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

45234/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0267252

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0028433

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0267252

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG3694

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 10 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 10 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Gγ30A

Transgenic constructs containing regulatory region of Gγ30A

Aberrations (Deficiencies and Duplications) ( 0 )

Inferred from experimentation ( 0 )

Inferred from location ( 4 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

Gγ30A^GD13178

viable, with Scer\GAL4^Mef2.PR

Gγ30A^GD13178

viable, with Scer\GAL4^pnr-MD237

Gγ30A^GD13178

viable, with Scer\GAL4^tin.CΔ4

Gγ30A^GD13178

Sterility

Allele

fertile

Other Phenotypes

Allele

abnormal neurophysiology

Gγ30A^{C69G.ninaE.Tag:MYC}

abnormal sensory perception

Gγ30A^e00834

abnormal sensory perception, with Scer\GAL4^Gr21a.9.323

Gγ30A^NIG.18511R

abnormal sensory perception (with Df(2L)ED678)

Gγ30A^e00834

Phenotype manifest in

Allele

adult olfactory receptor neuron Gr21a/63a

Gγ30A^e00834

adult olfactory receptor neuron Gr21a/63a, with Scer\GAL4^Gr21a.9.323

Gγ30A^NIG.18511R

adult olfactory receptor neuron Gr21a/63a (with Df(2L)ED678)

Gγ30A^e00834

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (14)

Hsap\GNG13

11 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (16)

Rnor\Gng13

11 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Mus musculus (laboratory mouse) (16)

Mmus\Gng13

10 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Xenopus tropicalis (Western clawed frog) (9)

Xtro\gng13

10 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Danio rerio (Zebrafish) (19)

Drer\gng13a

11 of 14

Yes

Drer\gng13b

11 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Drer\si:ch211-286b5.5

1 of 14

Drer\si:dkey-204f11.64

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (2)

Cele\gpc-2

11 of 14

Yes

Cele\gpc-1

1 of 14

Anopheles gambiae (African malaria mosquito) (3)

Agam\AgaP_AGAP009953

11 of 12

Yes

Agam\AgaP_AGAP000232

1 of 12

Agam\AgaP_AGAP010589

1 of 12

Arabidopsis thaliana (thale-cress) (0)

Saccharomyces cerevisiae (Brewer's yeast) (0)

Schizosaccharomyces pombe (Fission yeast) (0)

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:Gγ30A. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (2)

CG43324

1 of 13

Gγ1

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 1 )

Allele

Disease

Interaction

References

Gγ30A^HMS01362

ameliorates amyotrophic lateral sclerosis type 10

modeled by Hsap\TARDBP^{M.UAS.Tag:FLAG}

(Azpurua et al., 2021)

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

GNG13; G protein subunit gamma 13

11 of 14

607298

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

Gγ30A - Gprk1

pull down, autoradiography

(Lee et al., 2004)

Summary of Genetic Interactions

Interaction Browsers

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Subunit Structure (UniProtKB)

G proteins are composed of 3 units, alpha, beta and gamma. Interacts with Gbeta76C/Guanine nucleotide-binding protein subunit beta-2 (By similarity).

(UniProt, Q9NFZ3 )

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0267252

MIST (protein-protein) - An integrated Molecular Interaction Database

45234

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

Reactome Metabolic Pathways - An open-source, open access, manually curated and peer-reviewed metabolic pathway database.

Adrenaline,noradrenaline inhibits insulin secretion

External Data

Linkouts

KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.

Phototransduction - fly

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Class of Gene

gene_with_edited_transcript

(Rodriguez et al., 2012, Graveley et al., 2011)

gene_with_stop_codon_read_through

(Jungreis et al., 2011)

nuclear_gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-35

Cytogenetic map

30A7-30A8

Sequence location

2L:9,256,563..9,302,494 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

30A7-30A8

Limits computationally determined from genome sequence between P{PZ}tai⁰¹³⁵¹ and P{PZ}scat¹&P{PZ}numb⁰³²³⁵;

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

30A-30A

(Huber et al., 1999, Schulz, 1999.10.20)

30A-30A

(determined by in situ hybridisation)

(Schulz et al., 1999)

Experimentally Determined Recombination Data

Location

2-35

(FlyBase, 2016)

2-30.2

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (64)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

48493

w¹¹¹⁸; P{GMR12C02-GAL4}attP2

48503

w¹¹¹⁸; P{GMR12D09-GAL4}attP2

48537

w¹¹¹⁸; P{GMR13A04-GAL4}attP2

48541

w¹¹¹⁸; P{GMR13B01-GAL4}attP2

48545

w¹¹¹⁸; P{GMR13B07-GAL4}attP2

48551

w¹¹¹⁸; P{GMR13C04-GAL4}attP2

Korea

16112

P{R13G01-lexA::GADfl}attP2

16110

P{R13G01-lexA::GADfl}attP18

16111

P{R13G01-lexA::GADfl}attP40

16044

PBac{R13G01-lexA::GADfl}VK00027

VDRC

v102706

P{KK112230}VIE-260B

v26872

w¹¹¹⁸; P{GD13178}v26872

More stocks available...

Genomic Clones (44)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (320)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

HL05773

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0267252

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

New annotation (CG43733) in release 5.44 of the genome annotation.

(FlyBase Genome Annotators, 2012)

Relationship to Other Genes

Source for database merge of

Source for merge of: Gγ30A CG18511

(Bayraktaroglu, 2000.8.7)

Source for merge of: Gγ30A CG3694

(FlyBase, 1996-)

Source for merge of: Gγ30A CG43733

(FlyBase Genome Annotators, 2014)

Additional comments

Annotations CG3694 and CG43733 merged in release 5.56 of the genome annotation; annotation ID CG3694 retained. CG43733 corresponds to the additional extent of the CDS created by stop-codon-read-through.

(FlyBase Genome Annotators, 2014)

Source for merge of Gγ30A CG3694 was a shared cDNA ( date:010720 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Nomenclature comments

Etymology

Synonyms and Secondary IDs (18)

Reported As

Symbol Synonym

CG18511

(Boto et al., 2010, Blake et al., 2001)

CG3694

(National Institute of Genetics Fly Stocks, 2022-, Hanlon and Andrew, 2015, Boto et al., 2010, Khanna et al., 2010, Ni et al., 2010.12.1, Keleman et al., 2009.8.5, Perkins et al., 2009.1.15)

CG43733

(National Institute of Genetics Fly Stocks, 2022-, FlyBase Genome Annotators, 2012)

G-gamma30A

(Bakal et al., 2007)

G_γ30A

(Boto et al., 2010)

G_γ

(Montell, 2000)

GNG gene like

(Krishnan et al., 2015)

Galpha30A

(Yang et al., 2005)

Ggamma

(Huber et al., 1999)

Ggamma30A

(Corthals et al., 2023, National Institute of Genetics Fly Stocks, 2022-, Tsai et al., 2019, Lee et al., 2018, Gene Disruption Project members, 2015-, Ugrankar et al., 2015, Ashwal-Fluss et al., 2014, Riveron et al., 2013, Rodriguez et al., 2012, Jungreis, 2011.11.18, Hazelett et al., 2009, Yang et al., 2005, Pedra et al., 2004)

Gγ

(Hanlon and Andrew, 2015, Bardin et al., 2004, Lee et al., 2004, Zelhof et al., 2003, Zemelman et al., 2002, Schulz et al., 2001)

Gγ_e

(Blake et al., 2001, Harris and Lim, 2001, Schulz et al., 1999)

Gγe

(Hanlon and Andrew, 2015, Boto et al., 2010, Schillo et al., 2004)

lincRNA.S701

(FlyBase Genome Annotators, 2014, Young et al., 2012)

Name Synonyms

G protein gamma subunit 30A

G protein subunit γ at 30A

G protein γ30A

(Sharma et al., 2011, Khanna et al., 2010, Huber et al., 1999)

Secondary FlyBase IDs

FBgn0028433
FBgn0032107
FBgn0032108
FBgn0263984

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 129 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

45234

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q9NFZ3

UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information

Q9NFZ3

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q9NFZ3

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

45234/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0267252

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0267252

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG3694

MARRVEL_MODEL - MARRVEL (model organism gene)

45234

Linkouts

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0267252

DroID - A comprehensive database of gene and protein interactions.

FBgn0267252

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0028433

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0267252

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG3694

FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.

FBgn0267252

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.

Phototransduction - fly

MIST (protein-protein) - An integrated Molecular Interaction Database

45234

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Reactome Metabolic Pathways - An open-source, open access, manually curated and peer-reviewed metabolic pathway database.

Adrenaline,noradrenaline inhibits insulin secretion

References (98)

The following external sites may use different assemblies or annotations than FlyBase.

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