FlyBase Aberration Report: Dmel\Df(3R)l26d

General Information

Symbol

Df(3R)l26d

Species

D. melanogaster

Name

FlyBase ID

FBab0002836

Feature type

chromosomal_deletion

Computed Breakpoints include

87D11-87D13;87E5

Features within 87D11--87E5

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Incardona and Rosenberry, 1996, Hall and Kankel, 1976)

Breakpoints

87D11-87D13;87E3-87E5

(Incardona and Rosenberry, 1996, Hall and Kankel, 1976)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

snk << bk1 << Hsc70-2 << l(3)87Ef << bk2 << l(3)87Eg

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped

(Gausz et al., 1986, Spierer et al., 1983)

Molecular coordinates of distal breakpoint between +79.5 and +90.5, of proximal breakpoint between -160.5 and -157.5 (Spierer et al., 1983). break at -160 (Gausz et al., 1986)

Comments on Cytology

Limits of break 1 from polytene analysis (FBrf0028767) Left limit of break 2 from inclusion of l(3)87Ef (FBrf0034888) Right limit of break 2 from polytene analysis (FBrf0028767)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Ace

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980, Hall and Kankel, 1976)

Hsc70-2

(DeLotto and Spierer, 1986)

l(3)87Eb

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Ec

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Ee

(Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Ef

(Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

pic

(Clark and Chovnick, 1986, DeLotto and Spierer, 1986, Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

sim

(Nambu et al., 1990, DeLotto and Spierer, 1986, Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

Su(var)3-7

(Reuter et al., 1987)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

CtBP

(DeLotto and Spierer, 1986, Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

E(var)87F

(Reuter et al., 1987)

l(3)87Db

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Dc

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Dd

(DeLotto and Spierer, 1986, Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Df

(DeLotto and Spierer, 1986, Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Eg

(Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Eh

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Ei

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

l(3)87Ej

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

mesA

(DeLotto and Spierer, 1986, Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

mesB

(DeLotto and Spierer, 1986, Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

Pp1-87B

(Reuter et al., 1987)

(DeLotto and Spierer, 1986, Bossy et al., 1984, Rushlow and Chovnick, 1984, Hall et al., 1983, Spierer et al., 1983, Hilliker et al., 1981, Hilliker et al., 1980)

snk

(DeLotto and Spierer, 1986)

Spc25

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

Su(var)3-13

(Reuter et al., 1987)

Su(var)3-14

(Reuter et al., 1987)

yrt

(Rushlow and Chovnick, 1984, Hilliker et al., 1981, Hilliker et al., 1980)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Suppresses the position effect variegation of ry seen in In(3R)ry^ps11136.

(Rushlow and Chovnick, 1984)

NOT in combination with other aberrations

or the CNS phenotype. The construct shows that the midline cells are disorganised compared to wild type at stage 11 and at stage 13 are clustered near the ventral surface of the embryo leading to the collapse of the two lateral CNS hemiganglia and fusion of the longitudinal connectives. The presence of Ecol\lacZ^sim.7.8 construct fails to rescue lethality

(Nambu et al., 1990)

CNS defect.

(Thomas et al., 1988)

Stocks (0)

Notes on Origin

Discoverer

Chovnick.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

Df(3R)126d

(Crews et al., 1992)

Df(3R)l26d

(Hall et al., 1980)

Name Synonyms

Secondary FlyBase IDs

References (22)

Report Sections

Open Close