FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Allele: Dmel\rib1
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General Information
Symbol
Dmel\rib1
Species
D. melanogaster
Name
FlyBase ID
FBal0014572
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
ribIK
Key Links
Genomic Maps

Nature of the Allele
Progenitor genotype
Cytology
Description

Amino acid replacement: ?282term.

Amino acid replacement: R283term.

Nucleotide substitution: A?T.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Nucleotide change:

A19278975T

Reported nucleotide change:

A?T

Amino acid change:

R283term | rib-PA; R283term | rib-PB; R283term | rib-PC

Reported amino acid change:

R283term

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

rib1/rib35.14 and rib1/rib55.25 transheterozygous embryos display a significant increase in defects in the fusion together and compaction of primordial germ cells and somatic gonadal precursor cells, as compared to controls.

The developing salivary glands in rib1 mutant animals fail to turn and migrate properly. In addition, the dorsal trunks of the trachea exhibit only partial extension at stage 14, but relatively normal extension of dorsal and visceral branches occurs. These defects are also observed in rib1/ribP7 animals.

rib1/ribP7 mutant animals have normal salivary gland epithelial cell architecture, but exhibit short lumena with distally tilted apical-basal cell axes. There are reduced numbers of apical vesicles and increased microvillar structure.

Salivary gland cells form a wider and shorter tube than normal in mutant embryos, with the distal tip at the "turning point" (the point where the cells turn to reorient their movement posteriorly in wild-type embryos).

The specification of tracheal primordia appears to be normal in these mutants. There are also no overt differences in the shape and size of tracheal placodes and the invagination of tracheal cells is initiated with similar timing and positioning as wild-type. Differences are first apparent during stage 12, when outgrowth of branches is either absent or delayed. By stage tracheae are clearly defective in a subset of branches. In most segments the dorsal trunk (DT) is completely absent, and cells are clustered at the position within the tracheal sac from which the DT cells normally migrate. In a few metameres, the cluster of DT cells in the trachea have fewer cells, and the corresponding dorsal branch contain additional cells. The lateral trunk (LT) and ganglionic branch (GB) are also defective, both branches are stunted and often the LT is completely absent. Unlike the DTs, which only rarely migrate, migrating GBs are frequently observed at later stages, although they are often misrouted. Migration of the other two primary branches the dorsal branch and the visceral branch are generally unaffected, except for occasional extra DB cells. The lumina of all branches of trachea appear more dilated than in wild-type. In rib2/rib2 or rib2/rib1 larvae, of those with scorable cuticles, small anterior dorsal holes and puckering of the dorsal epidermis occur in 36% of mutants and large dorsal holes occur in 64% of mutants. Denticle belt phenotypes are also seen. The lateral extent of rib2/rib2 denticle belts is narrowed to 27% that of wild-type, rib2/rib1 belts reduced to 46%. A loss of denticle diversity is also seen in the embryos. The secretory gland primordia in rib1 mutants are indistinguishable from those in wild-type embryos, and internal invagination proceeds normally. However secretory cells do not migrate past the point at which wild-type cells turn and migrate posteriorly - they never reach their final destination. At late stages, the lumina of the salivary glands are greatly enlarged compared to wild-type glands. The salivary duct also fails to undergo proper morphogenesis in mutants. In late stage mutant embryos, either no tubes or rudimentary individual tubes connect to the secretory glands; these semi-tubular structures do not elongate and never elaborate into a normal duct.

Homozygous and rib1/Df(2R)rib-ex12 embryos show defects in tracheal branch outgrowth. A small number of ribP16/rib1 escapers survive to adulthood.

The salivary gland of mutant embryos is short and wide with an open lumen. Malpighian tubules are much shorter and wider than wild type. Embryos show a failure of dorsal closure and lack midgut constrictions. Embryos lack cuticular hairs and denticles almost completely. The remaining hairs are either much longer than normal or are abnormally curved.

Most epidermal cells remain polygonal during dorsal closure in homozygous embryos, in contrast to wild-type where the cells elongate dorsoventrally. Dorsal margin epidermal cells are conspicuously round in homozygous embryos and are larger than the more ventral epidermal cells. Some cells in the dorsolateral epidermis elongate slightly, but only a few cells elongate as much as wild-type embryos. The shape of the salivary glands and hindgut is abnormal, and the cells of both these organs are less columnar than in wild-type; salivary gland cells are approximately the same width as wild-type, but shorter than wild-type, and hindgut cells are both wider and shorter than wild-type. The salivary gland cells lack the wedge shape characteristic of wild-type salivary gland cells.

Malpighian tubules have a greater circumference than normal at their proximal end in homozygous embryos, giving them a gourd-like shape. The lumen of the tubules is greatly enlarged compared to wild-type. The epidermis never closes dorsally, the central nervous system fails to retract and the midgut does not constrict. Little if any head involution occurs. The secretory portion of the salivary gland is wider and has a much larger lumen than normal. In most embryos the salivary gland ducts do not move to the ventral midline and fuse, but remain open to the outside of the embryo. The hindgut is shorter and wider than normal, forming a bulb instead of a tube. Hindgut cells are less columnar than wild-type cells and the number of cells in the circumference of the hindgut is larger than normal. Tracheal branches usually fail to grow out, and those that do grow never contact branches from neighbouring segments. The tracheae that form have a larger diameter than normal. The peripheral nervous system (PNS) is mildly disorganised; the clusters of sense organs are indistinct and compacted dorsoventrally. The two ventral clusters and lateral cluster of each hemisegment are often combined into a single large cluster, and the dorsal clusters are compacted into a tight bunch. The five chordotonal organs of the lateral cluster are positioned randomly rather than in a straight row. The salivary gland and tracheal phenotypes are more severe in rib1/Df(2R)P34 hemizygous embryos.

narrow; fusion of adjacent denticle bands in ventral midline; dorsal closure defective. embryonic lethal lateral extents of belts

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Phenotype Manifest In
Suppressed by
NOT suppressed by
Enhancer of
Statement
Reference
NOT Enhancer of
Statement
Reference

rib[+]/rib1 is a non-enhancer of tracheal dorsal trunk primordium phenotype of lolalk02512

Other
Additional Comments
Genetic Interactions
Statement
Reference

lolalk02512 mutants show a higher proportion of salivary gland defects in combination with rib1/+. In these animals the salivary glands fail to turn and migrate properly. However, tracheal dorsal trunk defects are not enhanced in these animals at stage 14.

Expression of crbintra.Scer\UAS in the trachea under the control of Scer\GAL4btl.PS in rib1/ribP7 mutant animals partially rescues the tracheal dorsal trunk extension defects.

Expression of crbintra.Scer\UAS in the salivary gland under the control of Scer\GAL4fkh.PH in rib1/ribP7 animals fails to rescue salivary gland migration defects.

Expression of crbScer\UAS.cWa in the salivary gland under the control of Scer\GAL4fkh.PH in rib1/ribP7 animals fails to rescue salivary gland migration defects.

Expression of crbScer\UAS.cWa in the trachea under the control of Scer\GAL4btl.PS in rib1/ribP7 animals fails to rescue tracheal defects.

Expression of MoeT559A.Scer\UAS.T:Hsap\MYC in the trachea under the control of Scer\GAL4btl.PS in rib1/ribP7 mutant animals partially rescues the dorsal trunk extension defects.

Expression of MoeT559A.Scer\UAS.T:Hsap\MYC in the salivary gland under the control of Scer\GAL4fkh.PH in rib1/ribP7 mutant animals fails to rescue the salivary gland migration defects.

The rib1 salivary gland phenotype is partially suppressed by zipmhc-c1.3 and zip2. The rib1 Malpighian tubule phenotype is partially suppressed by zipmhc-c1.3 or zip2. The rib1 dorsal closure and midgut constriction phenotype is not affected by zip2. The rib1 cuticle phenotype is suppressed by zip2, causing a substantial increase in the number of denticles and hairs present on the embryonic cuticle.

rib1 raw1 double mutant embryos have rudimentary salivary glands and have smaller tracheae than in rib1 single mutant embryos. The PNS is grossly disorganised in rib1 raw1 double mutant embryos, with nearly the entire PNS of each segment being clustered along the dorsal edge of the epidermis. Axons are not apparent.

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Partially rescued by
Comments

The defects exhibited by rib1/rib55.25 transheterozygous embryos to fuse together and compact primordial germ cells and somatic gonadal precursor cells are partially rescued by the expression of ribScer\UAS.cBa under the control of Scer\GAL4how-24B.

Images (0)
Mutant
Wild-type
Stocks (2)
Notes on Origin
Discoverer
Comments
Comments

Allelic series: rib2/rib2 < rib2/rib1 = rib2/Df < rib1/rib1 = rib1/Df.

Based on the extent of salivary gland development, the following rib alleles can be ranked from strongest to weakest as follows: Df(2R)rib-ex12 > ribP7 > rib1/ribP7 > rib1.

Based on the extent of tracheal development, the following rib alleles can be ranked from strongest to weakest as follows: Df(2R)rib-ex12 > rib1/ribP7 > rib1 > ribP7.

External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (2)
References (14)