FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Allele: Dmel\Wnt5400
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General Information
Symbol
Dmel\Wnt5400
Species
D. melanogaster
Name
FlyBase ID
FBal0159537
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Nature of the Allele
Progenitor genotype
Cytology
Description

Imprecise excision of the P{GT1}Wnt5BG00642 insertion has created a deletion that removes most of the Wnt5 coding region, including the start.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Mutant animals show defects in the mushroom body: approximately 30% lack the α lobe, while approximately 50% lack both the α and β lobes. In those animals where α axons are affected, approximately 60% of the α axons show misguidance, while the rest show growth defects. Mushroom body αβ neurons which show guidance defects in both the α and β branches are seen.

In 17% of the hemisegments in Wnt5400 stage 16 embryos, lateral transverse muscles (LTMs) bypass their normal attachment at the epidermis at muscle 12 and instead extend ventrally beyond muscle 13 and attach at a novel epidermal site located close to muscle fiber 7. Occasionally, either muscle 6 or muscle 7 is absent. This LTM overextension phenotype is seen in 8% of third instar larvae.

The epidermal clusters of tendon cell precursors in stage 11/12 Wnt5400 mutant embryos are similar in size and location to wild type clusters.

At embryonic stage 17, Wnt5400 mutants exhibit broken Fas2 fascicles mainly in the lateral pathway.

The early trajectories of pioneer axons in Wnt5400 mutants are similar to that of wild-type embryos.

Loss of Wnt5 in Wnt5400 mutants affects the defasciculation of the MP1/dMP2 and pcCC/vMP2 pathways, resulting in a single fascicle, thinning or breaks.

Approximately 67% of antennal lobes are not connected by commissures in homozygous adults. The antennal lobes appear flattened dorsally and elongated ventrally, due to a 'collapse' of the dorsomedial region of the lobe. The olfactory receptor neuron (ORN) axons show a number of targeting defects, including taking meandering paths to their targets, looping back on the ipsilateral glomeruli, projecting aberrantly to dorsal regions of the brain and terminating on ectopic glomeruli. The pattern of projection neuron dendrites in the antennal lobe neuropil is disrupted and many dendritic arbors are displaced ventrally. The misshapen antennal lobe phenotype is apparent by 50 hours after puparium formation.

The antennal lobes are misshapen in animals carrying large homozygous ORN clones. Scer\GAL4OK72-positive ORNs project to a slightly more dorsal position than that of controls and form distorted and split glomeruli. Their contralateral axons often appear defasciculated and fail to cross the midline (instead looping back on their ipsilateral targets).

The brains of Wnt5400 flies show a reduction in the number of dorsal cluster neuron axons that cross the optic chiasm (from 11.7 on average in wild type to 7.9 in Wnt5400 mutants).

Wnt5400/Df(1)E128 embryos show CNS phenotypes of similar severity to those seen in Wnt5400 homozygous mutants, indicating Wnt5400 is a null allele.

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Enhanced by
Statement
Reference

Wnt5400 has abnormal neuroanatomy phenotype, enhanceable by fz[+]/fz15

Wnt5400 has abnormal neuroanatomy phenotype, enhanceable by fz2[+]/fz2C1

Wnt5400 has abnormal neuroanatomy phenotype, enhanceable by dsh1/dsh[+]

NOT Enhanced by
Statement
Reference

Wnt5400 has viable phenotype, non-enhanceable by Ror[+]/Ror4

Suppressed by
Statement
Reference

Wnt5400 has abnormal neuroanatomy phenotype, suppressible by CadNM19

NOT suppressed by
Statement
Reference

Wnt5400 has viable phenotype, non-suppressible by Ror[+]/Ror4

Enhancer of
Statement
Reference

Wnt5400/Wnt5[+] is an enhancer of abnormal neuroanatomy phenotype of DAAMEx1

Wnt5400/Wnt5[+] is an enhancer of abnormal neuroanatomy phenotype of fz15

Wnt5400/Wnt5[+] is an enhancer of abnormal neuroanatomy phenotype of dsh1

NOT Enhancer of
Statement
Reference

Wnt5400/Wnt5[+] is a non-enhancer of abnormal neuroanatomy | adult stage | dominant phenotype of tapGal4

Suppressor of
NOT Suppressor of
Statement
Reference
Other
Phenotype Manifest In
Enhanced by
Statement
Reference

Wnt5400 has fascicle phenotype, enhanceable by uzipD43

Wnt5400 has larval MP1 neuron phenotype, enhanceable by uzipD43

Wnt5400 has MP1 tract phenotype, enhanceable by uzipD43

Wnt5400 has vMP2 tract phenotype, enhanceable by uzipD43

Wnt5400 has axon & dorsal cluster neuron phenotype, enhanceable by fz[+]/fz15

Wnt5400 has axon & dorsal cluster neuron phenotype, enhanceable by fz2[+]/fz2C1

Wnt5400 has axon & dorsal cluster neuron phenotype, enhanceable by dsh1/dsh[+]

NOT Enhanced by
Statement
Reference
Suppressed by
Statement
Reference

Wnt5400 has larval MP1 neuron phenotype, suppressible by CadNM19

Wnt5400 has MP1 tract phenotype, suppressible by CadNM19

Wnt5400 has vMP2 tract phenotype, suppressible by CadNM19

Wnt5400 has fascicle phenotype, suppressible by CadNM19

NOT suppressed by
Statement
Reference

Wnt5400 has adult antennal lobe phenotype, non-suppressible by drl[+]/drl2

Wnt5400 has adult antennal lobe phenotype, non-suppressible by drl2/drl2

Enhancer of
Statement
Reference

Wnt5400/Wnt5[+] is an enhancer of adult mushroom body alpha-lobe phenotype of DAAMEx1

Wnt5400/Wnt5[+] is an enhancer of adult mushroom body beta-lobe phenotype of DAAMEx1

Wnt5400/Wnt5[+] is an enhancer of axon & dorsal cluster neuron phenotype of fz15

Wnt5400/Wnt5[+] is an enhancer of axon & dorsal cluster neuron phenotype of dsh1

NOT Enhancer of
Statement
Reference

Wnt5400/Wnt5[+] is a non-enhancer of adult mushroom body alpha-lobe | adult stage phenotype of tapGal4

Suppressor of
Statement
Reference

Wnt5400 is a suppressor of larval MP1 neuron phenotype of CadNM19

Wnt5400 is a suppressor of dMP2 neuron phenotype of CadNM19

Wnt5400 is a suppressor of pCC neuron phenotype of CadNM19

Wnt5400 is a suppressor of MP1 tract phenotype of CadNM19

Wnt5400 is a suppressor of vMP2 tract phenotype of CadNM19

Wnt5400/Wnt5[+] is a suppressor of adult antennal lobe phenotype of drl2

NOT Suppressor of
Statement
Reference
Other
Additional Comments
Genetic Interactions
Statement
Reference

Wnt5400/+ does not significantly enhance frequency of mushroom body beta lobe axon overgrowth defects in tapGal4/+ brains.

One copy of Wnt5400 enhances the defects seen in the axonal projection defects seen in the α and β lobes of DAAMEx1 mutant mushroom bodies.

The axon commissure switching phenotype seen in embryos expressing two copies of Drl-2Scer\UAS.T:Hsap\MYC under the control of Scer\GAL4eg-Mz360 is completely suppressed by Wnt5400/Y.

In 36% of the hemisegments in drlRed2 Wnt5400 double mutant embryos, the lateral transverse muscles (LTMs) bypass their normal attachment at the epidermis at muscle 12 and instead extend ventrally beyond muscle 13 and attach at a novel epidermal site located close to muscle fiber 7. This is similar to the number seen in drlRed2 single mutants, but significantly more than is seen in Wnt5400 mutants.

In 16% of the hemisegments in Wnt5400/+ ; Df(2L)Exel6043/+ stage 16 embryos, the lateral transverse muscles (LTMs) bypass their normal attachment at the epidermis at muscle 12 and instead extend ventrally beyond muscle 13 and attach at a novel epidermal site located close to muscle fiber 7. In males that are hemizygous for Wnt5400 and heterozygous for Df(2L)Exel6043 27% of hemisegments show attachment defects.

Wnt2L and Wnt4C1 do not enhance the lateral transverse muscle attachment defects seen in Wnt5400 mutant stage 16 embryos.

Wnt5400 uzipD43 double mutants exhibit an enhancement of the broken fascicles found in Wnt5400 single mutants.

The early trajectories of pioneer axons in CadNM19 Wnt5400 double mutants are similar to that of wild-type embryos.

Wnt5400 uzipD43 double mutants exhibit an enhancement of the defasciculation of the MP1/dMP2 and pcCC/vMP2 pathways.

drl2/+ has no effect on the antennal lobe phenotype of Wnt5400 homozygotes.

Wnt5400/Y drl2/drl2 double mutants have antennal lobes with the characteristic shape seen in Wnt5400/Y single mutants.

Wnt5400/+ suppresses the antennal lobe phenotypes of drl2 mutants (both the dorsomedial antennal lobe protrusions and the glomerular defects are suppressed).

Wnt5400/+, dsh1/+ double mutants show a more severe dorsal cluster neuron axon phenotype than either single mutant.

Wnt5400/+; fz15/+ brains show a synergistic reduction in the number of dorsal cluster neuron axons that reach the medulla.

Wnt5400/+; fz2C1/+ brains show a small but significant decrease in the number of dorsal cluster neuron axons that reach the medulla compared to Wnt5400/+ brains.

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Partially rescued by
Comments

Expression of Wnt5Scer\UAS.cFa under the control of any of Scer\GAL4how-24B, Scer\GAL4Mef2.PR or Scer\GAL4sr-md710 rescues the lateral transverse muscle attachment defects seen in Wnt5400 mutant stage 16 embryos. Expressing Wnt5Scer\UAS.cFa under the control of Scer\GAL4tey-5053A is unable to rescue the phenotype.

Expression of Wnt5Scer\UAS.cFa under the control of either Scer\GAL4GH146 or Scer\GAL4Mz317 does not rescue the antennal lobe defects seen in Wnt5400 flies.

Expression of Wnt5Scer\UAS.cFa under the control of either Scer\GAL4SG18.1 or Scer\GAL4OK72 partially rescues the antennal lobe defects seen in Wnt5400 flies: the abnormal shape is rescued, the abnormal position of the Or47b glomerulus relative to the dorsal edge of the lobe is partially rescued and a commissure connects the antennal lobes in 55% or 77% of cases respectively.

Images (0)
Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (3)
References (16)