FB2026_03 , released September 17, 2026
Human Disease Model Report: intellectual disability, X-linked 106
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General Information
Name
intellectual disability, X-linked 106
FlyBase ID
FBhh0001464
Overview

This report describes intellectual disability, X-linked 106 (XLID106), which is one of the series of diseases classified as intellectual disability, X-linked, nonsyndromic. The human gene implicated in this disease is OGT, a glycosyltransferase that catalyzes the addition of a single N-acetylglucosamine in O-glycosidic linkage to serine or threonine residues. There is a single orthologous gene in Drosophila, Dmel\sxc, for which classical loss-of-function alleles, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated.

UAS constructs of the human Hsap\OGT gene have been introduced into flies. Heterologous rescue (functional complementation) of amorphic phenotypes of Dmel\sxc has been demonstrated (FBrf0208697).

Variant(s) implicated in human disease tested (as analogous mutation in fly gene): L283F, R313P, and A348T in the Dmel\sxc gene (corresponds to L254F, R284P, and A319T in the human OGT gene). See the 'Disease-Implicated Variants' table below.

Amorphic and loss-of-function mutations of Dmel\sxc are lethal when homozygous; some alleles survive to pharate adult stages, allowing phenotypic assessment. Neuroanatomy-defective and neurophysiology-defective phenotypes are observed. Physical interactions of the Dmel\sxc protein product have been described; see below and in the FlyBase gene report for sxc.

[updated Apr. 2024 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: intellectual disability, X-linked, nonsyndromic
Symptoms and phenotype

Intellectual disability is characterized by impairments in intellectual functioning and adaptive behavior; symptoms must be present before a child becomes 18 years old (http://medical-dictionary.thefreedictionary.com/mental+retardation; 2016.01.19).

Intellectual disability can be subdivided into syndromic forms, characterized by cognitive impairment accompanied by dysmorphic features, malformations or neurological abnormalities, and nonsyndromic forms, characterized by cognitive impairment without additional features (Basel-Vanagaite, 2008; DOI: 10.1002/9780470015902.a0021454).

Specific Disease Summary: intellectual disability, X-linked 106
OMIM report

[INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED 106; XLID106](https://omim.org/entry/300997)

Human gene(s) implicated

[O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE; OGT](https://omim.org/entry/300255)

Symptoms and phenotype

Affected patients show decreased intellectual ability. In addition, all patients show mental and physical developmental delay, including intrauterine growth retardation, low birth weight, short stature, drooling, and delayed and/or very restricted language skills (Pravata et al., 2020; pubmed:32080367).

Genetics

X-linked intellectual developmental disorder-106 is caused by hemizygous mutation in the OGT gene on chromosome Xq13. [from MIM:300997; 2022.06.10]

Cellular phenotype and pathology
Molecular information

OGT encodes a glycosyltransferase that catalyzes the addition of a single N-acetylglucosamine in O-glycosidic linkage to serine or threonine residues. Since both phosphorylation and glycosylation compete for similar serine or threonine residues, the two processes may compete for sites, or they may alter the substrate specificity of nearby sites by steric or electrostatic effects. The protein contains multiple tetratricopeptide repeats that are required for optimal recognition of substrates. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [Gene Cards, OGT; 2022.06.10]

OGT catalyzes the addition of a single N-acetylglucosamine in O-glycosidic linkage to serine or threonine residues. [from MIM:300255; 2022.06.10]

External links
Disease synonyms
intellectual developmental disorder, X-linked 106
mental retardation, X-linked 106
MRX106
OGT-associated Congenital Disorder of Glycosylation
OGT-CDG
XLID106
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

One to one: human gene to Drosophila gene.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (1)
    Gene Snapshot
    super sex combs (sxc) encodes a protein O-GlcNAc transferase that catalyzes the attachment of N-acetyl-β-D-glucosamine (GlcNAc) to the hydroxyl group of a serine or threonine residue in cytosolic or nuclear proteins. O-GlcNAcylation is a dynamic post-translational modification that plays important roles in biological processes such as metabolism and neurodegeneration. [Date last reviewed: 2025-03-20]
    Cellular component (GO)
    Gene Groups / Pathways
    Comments on ortholog(s)

    High-scoring ortholog of human OGT; (1 Drosophila to 1 human).

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Other Genes Used: Viral, Bacterial, Synthetic (0)
      Summary of Physical Interactions (4 groups)
      protein-protein
      Interacting group
      Assay
      References
      anti bait coimmunoprecipitation, western blot
      protein-protein
      Interacting group
      Assay
      References
      anti tag coimmunoprecipitation, anti tag western blot
      anti tag coimmunoprecipitation, western blot, anti bait coimmunoprecipitation, anti tag western blot
      anti bait coimmunoprecipitation, anti tag western blot
      Alleles Reported to Model Human Disease (Disease Ontology) (9 alleles)
      Models Based on Experimental Evidence ( 9 )
      Modifiers Based on Experimental Evidence ( 6 )
      Alleles Representing Disease-Implicated Variants
      Genetic Tools, Stocks and Reagents
      Sources of Stocks
      Contact lab of origin for a reagent not available from a public stock center.
      Bloomington Stock Center Disease Page
      Related mammalian, viral, bacterial, or synthetic transgenes
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila transgenes
      Allele
      Transgene
      Publicly Available Stocks
      RNAi constructs available
      Allele
      Transgene
      Publicly Available Stocks
      Selected Drosophila classical alleles
      Allele
      Allele class
      Mutagen
      Publicly Available Stocks
      CRISPR/Cas9
      CRISPR/Cas9
      CRISPR/Cas9
      CRISPR/Cas9
      CRISPR/Cas9
      CRISPR/Cas9
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      amorphic allele - molecular evidence
      ethyl methanesulfonate
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      amorphic allele - genetic evidence
      ethyl methanesulfonate
      amorphic allele - molecular evidence
      References (7)