Please see the JBrowse view of Dmel\nemy for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.49
Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.55
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\nemy using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: AMG
Comment: reported as crystal cell specific anlage
Comment: reported as plasmatocytes anlage
nemy is expressed in anterior midline glia but not in posterior midline glia in stage 12 embryos.
nemy transcripts are detected in third instar larval brains in the midline cells, ventral nerve cord, and in a bilaterally paired cell in the abdominal ganglion (A8). Strong signal is also observed in a pair of descending neurons and in a subset of protocerebral neurons. It is partially co-expressed with Phm.
Expression pattern inferred from unspecified enhancer trap line.
Expression is observed in the anterior midline glial cells.
JBrowse - Visual display of RNA-Seq signals
View Dmel\nemy in JBrowse2-67
2-69.7
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for merge of: CG8776 CG13147
Source for merge of: nemy CG8776
The "nemy" mutant was previously associated with the CG8772 annotation in FlyBase, based on information in GenBank accession AF417120. However, data from FBrf0207202 indicates that the nemy mutant phenotype is due to an effect on the neighbouring CG8776 annotation, and not due to an effect on CG8772. Thus, the CG8772 annotation has been split out into a separate gene report in FlyBase (and has been renamed CG42708 in release 5.26 of the genome annotation to avoid confusion) and the nemy mutant has instead been merged with the gene corresponding to the CG8776 annotation in FlyBase.
