FlyBase Gene Report: Dmel\Dlip3

FB2026_01 , released March 12, 2026

FB2026_01 , released March 12, 2026

Gene: Dmel\Dlip3

General Information

Symbol

Dmel\Dlip3

Species

D. melanogaster

Name

Dorsal interacting protein 3

Annotation Symbol

CG12767

Feature Type

protein_coding_gene

FlyBase ID

FBgn0040465

Gene Model Status

Stock Availability

7 publicly available

Gene Summary

Dorsal interacting protein 3 (Dlip3) encodes a transcription factor whose loss of function in the eye disc results in the appearance of extra photoreceptors. Dlip3 overexpression in the early eye disc results in antennal duplication and eye-to-antennal transformation. [Date last reviewed: 2019-03-07] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

Dip3

Key Links

Genomic Location

Cytogenetic map

Sequence location

2R:18,128,494..18,130,246 [+]

Recombination map

2-84

RefSeq locus

NT_033778 REGION:18128494..18130246

Sequence

Get Decorated FASTA

Genomic Maps

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (15 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (2 terms)

CV Term

Evidence

References

enables DNA-binding transcription factor activity

inferred from direct assay

(Bhaskar and Courey, 2002)

enables transcription coactivator activity

inferred from direct assay

(Bhaskar and Courey, 2002)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

enables DNA binding

inferred from electronic annotation with InterPro:IPR004210

(InterPro Project Members, 2004-)

Biological Process (8 terms)

Terms Based on Experimental Evidence (7 terms)

CV Term

Evidence

References

involved_in antennal development

inferred from mutant phenotype

(Duong et al., 2008)

involved_in dorsal/ventral pattern formation

inferred from mutant phenotype

(Ratnaparkhi et al., 2008)

inferred from genetic interaction with FLYBASE:dl; FB:FBgn0260632

(Ratnaparkhi et al., 2008)

involved_in immune response

inferred from mutant phenotype

(Ratnaparkhi et al., 2008)

involved_in negative regulation of compound eye photoreceptor development

inferred from mutant phenotype

(Duong et al., 2008)

involved_in negative regulation of eye photoreceptor cell development

inferred from mutant phenotype

(Duong et al., 2008)

involved_in positive regulation of transcription by RNA polymerase II

inferred from direct assay

(Bhaskar and Courey, 2002)

involved_in regulation of DNA-templated transcription

inferred from mutant phenotype

(Duong et al., 2008)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

involved_in regulation of transcription by RNA polymerase II

inferred from biological aspect of ancestor with PANTHER:PTN000956409

(GO Reference Genome Project, 2011-)

Cellular Component (4 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

located_in nuclear body

inferred from direct assay

(Duong et al., 2008)

located_in nuclear chromosome

inferred from direct assay

(Ratnaparkhi et al., 2008)

located_in nucleus

inferred from direct assay

(Ratnaparkhi et al., 2008, Bhaskar and Courey, 2002)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

is_active_in nucleus

inferred from biological aspect of ancestor with PANTHER:PTN000956409

(GO Reference Genome Project, 2011-)

part_of transcription regulator complex

inferred from biological aspect of ancestor with PANTHER:PTN000956409

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

MADF-BESS DOMAIN TRANSCRIPTION FACTORS

Protein Family (UniProt)

-

Protein Signatures (InterPro)

Summaries

Gene Snapshot

Dorsal interacting protein 3 (Dlip3) encodes a transcription factor whose loss of function in the eye disc results in the appearance of extra photoreceptors. Dlip3 overexpression in the early eye disc results in antennal duplication and eye-to-antennal transformation. [Date last reviewed: 2019-03-07]

Gene Group (FlyBase)

MADF-BESS DOMAIN TRANSCRIPTION FACTORS -: The MADF-BESS (Myb-SANT like in Adf) domain transcription factors are sequence-specific DNA binding proteins that regulate transcription. The MADF domain binds to multiple trinucleotide repeats and is often present in combination with a BESS domain that mediates protein-protein interactions. (Adapted from FBrf0155780 and FBrf0224045).

Summary (Interactive Fly)

MADF DNA-binding domain and BESS protein interaction domain protein - interacts with Rel domain proteins - enhances Rel family transcription factor function in both dorsoventral patterning and the immune response

Interactive Fly

Gene Model and Products

Number of Transcripts

1

Number of Unique Polypeptides

1

Please see the JBrowse view of Dmel\Dlip3 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q7JZD5)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.50

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

FBtr0086734

1471

348

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

FBpp0085913

39.7

348

6.19

Polypeptides with Identical Sequences

There is only one protein coding transcript and one polypeptide associated with this gene

Additional Polypeptide Data and Comments

Reported size (kDa)

343 (aa)

(Bhaskar et al., 2000)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Dlip3 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Dip3_1

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.55

Transcript Expression

expression microarray

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 9 -- 12

midline primordium | subset

(Kearney et al., 2004)

embryonic stage 13 -- 16

larval midline neuron

(Kearney et al., 2004)

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 7 -- 8

anterior endoderm anlage

(Fisher et al., 2012)

(Fisher et al., 2012)

(Fisher et al., 2012)

organism | faint | ubiquitous

(Fisher et al., 2012)

organism | ubiquitous

(Fisher et al., 2012)

posterior endoderm

(Fisher et al., 2012)

(Fisher et al., 2012)

embryonic stage 9 -- 10

central brain primordium

(Fisher et al., 2012)

ventral nerve cord primordium

(Fisher et al., 2012)

embryonic stage 11 -- 12

central brain primordium

(Fisher et al., 2012)

ventral nerve cord primordium

(Fisher et al., 2012)

embryonic stage 13 -- 16

embryonic brain

(Fisher et al., 2012)

larval ventral nerve cord

(Fisher et al., 2012)

wandering third instar larval stage

wing pouch | restricted

(Molnar et al., 2012)

wing hinge primordium | restricted

(Molnar et al., 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

immunolocalization

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage

larval central nervous system

(Duong et al., 2008)

presumptive maxillary palp

(Duong et al., 2008)

third instar larval stage

eye disc posterior to the morphogenetic furrow

(Duong et al., 2008)

interommatidial bristle

(Duong et al., 2008)

wandering third instar larval stage

eye photoreceptor cell

• nucleus

(Duong et al., 2008)

eye disc posterior to the morphogenetic furrow

• nucleus

(Duong et al., 2008)

Additional Descriptive Data

Dlip3 is expressed in photoreceptor cells posterior to the morphogenetic furrow in third instar larval eye discs. It is present starting in the fourth row of clusters posterior to the furrow in neuronal cells. It is also observed in many other neuronal cells such as those of the embryonic CNS, the maxillary palpus, and inter-ommatidial bristles. Neuronal expression persists from the third instar larval stage at least through pupal stages.

(Duong et al., 2008)

Dlip3 is localized to the nucleus in all eye photoreceptor cells. In the eye disc, Dlip3 is observed in the nuclei of R1-R7 photoreceptors, but not in non-neuronal cells, and is detected from the fourth row posterior to the morphogenetic furrow.

(Duong et al., 2008)

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in nuclear body

inferred from direct assay

(Duong et al., 2008)

located_in nuclear chromosome

inferred from direct assay

(Ratnaparkhi et al., 2008)

located_in nucleus

inferred from direct assay

(Ratnaparkhi et al., 2008, Bhaskar and Courey, 2002)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Dlip3 in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Dlip3

View exonic expression by tissue for Dmel\Dlip3

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0040465

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

53579/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0040465

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0040465

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0040465

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG12767

Flygut - An atlas of the Drosophila adult midgut

FBgn0040465

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\Dlip3

Stages(s) 1-3
Stages(s) 4-6
Stages(s) 7-8
Stages(s) 9-10
Stages(s) 11-12
Stages(s) 13-16

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 9 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 8 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Dlip3

Transgenic constructs containing regulatory region of Dlip3

Aberrations (Deficiencies and Duplications) ( 1 )

Inferred from experimentation ( 1 )

Gene disrupted in

(Ryder, 2004.4.26)

Inferred from location ( 3 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal | male limited, with Scer\GAL4^Bx-MS1096

Dlip3^{UAS.ORF.GW.Tag:HA}

lethal | male limited | cold sensitive, with Scer\GAL4^Bx-MS1096

Dlip3^{UAS.ORF.GW.Tag:HA}

partially lethal - majority die, with Scer\GAL4^{VP16.mat.αTub67C}

Dlip3^UASp.cRa

partially lethal - majority live

Dlip3¹

viable, with Scer\GAL4^ey.PH

viable, with Scer\GAL4^Mef2.PR

Dlip3^GD7636

viable, with Scer\GAL4^pnr-MD237

Dlip3^GD7636

Sterility

Allele

Dlip3¹

Other Phenotypes

Allele

abnormal immune response

Dlip3¹

increased cell death | pharate adult stage P15, with Scer\GAL4^hs.2sev

Dlip3^C00008

some die during embryonic stage, with Scer\GAL4^{VP16.mat.αTub67C}

Dlip3^UASp.cRa

visible, with Scer\GAL4^Bx-MS1096

Dlip3^C00008

visible, with Scer\GAL4^GMR.PF

Dlip3^C00008

visible, with Scer\GAL4^hs.2sev

Dlip3^C00008

visible, with Scer\GAL4^lz-gal4

Dlip3^C00008

visible | female limited, with Scer\GAL4^Bx-MS1096

Dlip3^{UAS.ORF.GW.Tag:HA}

visible | female limited | cold sensitive, with Scer\GAL4^Bx-MS1096

Dlip3^{UAS.ORF.GW.Tag:HA}

Phenotype manifest in

Allele

cone cell | increased number, with Scer\GAL4^hs.2sev

Dlip3^C00008

crossvein, with Scer\GAL4^Bx-MS1096

Dlip3^C00008

embryonic/larval cuticle

Dlip3¹

embryonic/larval cuticle | embryonic stage, with Scer\GAL4^{VP16.mat.αTub67C}

Dlip3^UASp.cRa

eye, with Scer\GAL4^GMR.PF

Dlip3^C00008

eye, with Scer\GAL4^hs.2sev

Dlip3^C00008

eye, with Scer\GAL4^lz-gal4

Dlip3^C00008

eye photoreceptor cell, with Scer\GAL4^hs.2sev

Dlip3^C00008

eye photoreceptor cell | cell non-autonomous | somatic clone | increased number

Dlip3¹

eye photoreceptor cell | increased number

ommatidium, with Scer\GAL4^GMR.PF

Dlip3^C00008

ommatidium, with Scer\GAL4^hs.2sev

Dlip3^C00008

ommatidium, with Scer\GAL4^lz-gal4

Dlip3^C00008

primary pigment cell | increased number, with Scer\GAL4^hs.2sev

Dlip3^C00008

rhabdomere, with Scer\GAL4^hs.2sev

Dlip3^C00008

wing | female limited, with Scer\GAL4^Bx-MS1096

Dlip3^{UAS.ORF.GW.Tag:HA}

wing | female limited | cold sensitive, with Scer\GAL4^Bx-MS1096

Dlip3^{UAS.ORF.GW.Tag:HA}

wing vein, with Scer\GAL4^Bx-MS1096

Dlip3^C00008

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (0)

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (0)

Mus musculus (laboratory mouse) (0)

Xenopus tropicalis (Western clawed frog) (0)

Danio rerio (Zebrafish) (6)

Drer\LOC100330838

1 of 14

Yes

No

Drer\LOC110439798

1 of 14

Yes

No

Drer\si:ch73-59f11.3

1 of 14

Yes

No

Drer\si:ch211-207i20.3

1 of 14

Yes

No

Drer\si:zfos-128g4.1

1 of 14

Yes

No

Drer\zgc:152938

1 of 14

Yes

No

Caenorhabditis elegans (Nematode, roundworm) (5)

2 of 14

Yes

No

1 of 14

No

No

1 of 14

No

No

1 of 14

No

No

1 of 14

No

No

Anopheles gambiae (African malaria mosquito) (8)

Agam\AgaP_AGAP002753

1 of 12

Yes

No

Agam\AgaP_AGAP005077

1 of 12

Yes

No

Agam\AgaP_AGAP006800

1 of 12

Yes

No

Agam\AgaP_AGAP009140

1 of 12

Yes

No

Agam\AgaP_AGAP011847

1 of 12

Yes

No

Agam\AgaP_AGAP012073

1 of 12

Yes

No

Agam\AgaP_AGAP012074

1 of 12

Yes

No

Agam\AgaP_AGAP013069

1 of 12

Yes

No

Arabidopsis thaliana (thale-cress) (0)

Saccharomyces cerevisiae (Brewer's yeast) (0)

Schizosaccharomyces pombe (Fission yeast) (0)

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:Dlip3. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (16)

3 of 13

2 of 13

2 of 13

2 of 13

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

anti tag coimmunoprecipitation, autoradiography

(Bhaskar and Courey, 2002)

Dlip3 - CG17118

anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based

(Rhee et al., 2014)

anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based

(Rhee et al., 2014)

two hybrid array

(Shokri et al., 2019)

anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based

(Rhee et al., 2014)

anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based

(Rhee et al., 2014)

anti tag coimmunoprecipitation, autoradiography

(Bhaskar and Courey, 2002)

anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based

(Rhee et al., 2014)

anti tag coimmunoprecipitation, autoradiography, two hybrid, pull down

(Bhaskar and Courey, 2002, Bhaskar et al., 2000)

two hybrid array

(Shokri et al., 2019)

two hybrid array

(Shokri et al., 2019)

two hybrid array

(Shokri et al., 2019)

two hybrid array

(Shokri et al., 2019)

anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based

(Rhee et al., 2014)

Summary of Genetic Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

suppressible

(Duong et al., 2008)

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

enhanceable

(Ratnaparkhi et al., 2008)

enhanceable

(Shukla et al., 2014)

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

72803

DroID - A comprehensive database of gene and protein interactions.

FBgn0040465

MIST (protein-protein) - An integrated Molecular Interaction Database

53579

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

Class of Gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

2R

Recombination map

2-84

Cytogenetic map

Sequence location

2R:18,128,494..18,130,246 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

55B7-55B7

Limits computationally determined from genome sequence between P{PZ}grh⁰⁶⁸⁵⁰&P{lacW}olf186-F^k11505 and P{PZ}Hsf⁰³⁰⁹¹&P{EP}Dgp-1^EP731

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

55B5-55B6

(Bhaskar, 1999.12.27)

Experimentally Determined Recombination Data

Location

2-84

(FlyBase, 2016)

2-88.7

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (7)

Aberrations including deletions of this gene Aberrations including duplications of this gene

27067

y¹ v¹; P{TRiP.JF02412}attP2

56838

y¹ w^*; PBac{Dlip3-GFP.FPTB}VK00031

83270

y¹ w^*; TI{CRIMIC.TG4.1}Dlip3^{CR01330-TG4.1}/SM6a

F000005

M{UAS-Dlip3.ORF.3xHA.GW}ZH-86Fb

2RG-0276

y² VhaAC39-1^cho-1 v¹; P{U6-Dlip3.NIG.sgRNA}attP40/CyO

v107803

P{KK111529}VIE-260B

v31828

w¹¹¹⁸; P{GD7636}v31828/TM3

Genomic Clones (18)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (30)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

RE40480

Other clones

DPiM_RE40480

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0040465

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0040465

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Duong et al., 2008, Ratnaparkhi et al., 2008)

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

Area matching Drosophila ESTs AI064169 and AA816652. Probable intron in gene represented by EST AI064169.

(Davies, 2001.3.15)

Identification: as a protein that interacts specifically with dl protein in a yeast two-hybrid assay.

(Bhaskar et al., 2000)

Relationship to Other Genes

Source for database merge of

Source for merge of: Dip3 CG12767

(Bayraktaroglu, 2000.8.7)

Source for merge of: Dip3 anon-WO0118547.169

(FlyBase, 1996-)

Additional comments

Source for merge of Dip3 anon-WO0118547.169 was sequence comparison ( date:051113 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Source for identity of: Dlip3 Dip3

(FlyBase, 2009-)

Nomenclature comments

Renamed from 'Dip3' to 'Dlip3' to be consistent with similar changes made to 'Dip1' and 'Dip2'.

(FlyBase, 2009-)

Etymology

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

CG12767

(National Institute of Genetics Fly Stocks, 2022-, Shukla et al., 2018, Shukla et al., 2014, Lee et al., 2010, Keleman et al., 2009.8.5, Perkins et al., 2009.3.31, Casola et al., 2007, Molnar et al., 2006, Dimova et al., 2003)

Dip3

(Park et al., 2019, Shukla et al., 2014, Victorsen and White, 2014.7.16, Antao et al., 2012, Korenjak et al., 2012, Duong et al., 2008, Duong et al., 2008, Ratnaparkhi and Courey, 2008, Ratnaparkhi et al., 2008, Wang et al., 2007, Molnar et al., 2006, Zimmermann et al., 2006)

Dlip3

(Shokri et al., 2019, Gene Disruption Project members, 2018-, Schertel et al., 2015)

anon-WO0118547.169

diap3

(Wang et al., 2020)

dip3

(Shukla et al., 2014, Wang et al., 2005, Bhaskar et al., 2000)

dlip3

(Shukla et al., 2018)

Name Synonyms

Dip3

(Moshkin et al., 2013)

Dorsal interacting protein 3

(Ratnaparkhi and Courey, 2008, Ratnaparkhi et al., 2008, Bhaskar, 1999.12.27)

dorsal interacting protein 3

(Ratnaparkhi et al., 2008)

Secondary FlyBase IDs

FBgn0034302
FBgn0062195

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 37 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

53579

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q7JZD5

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q7JZD5

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0040465

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

53579/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0040465

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0040465

FlyMine - An integrated database for Drosophila genomics

FBgn0040465

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG12767

MARRVEL_MODEL - MARRVEL (model organism gene)

53579

Linkouts

BioGRID - A database of protein and genetic interactions.

72803

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0040465

DroID - A comprehensive database of gene and protein interactions.

FBgn0040465

DRSC - Results frm RNAi screens

FBgn0040465

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Dip3_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0040465

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0040465

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG12767

Flygut - An atlas of the Drosophila adult midgut

FBgn0040465

Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution

Interactive Fly

MIST (protein-protein) - An integrated Molecular Interaction Database

53579

References (66)