FlyBase Gene Report: Dmel\CG43066

General Information

Symbol

Dmel\CG43066

Species

D. melanogaster

Name

Annotation Symbol

CG43066

Feature Type

protein_coding_gene

FlyBase ID

FBgn0262476

Gene Model Status

Current

Stock Availability

15 publicly available

Gene Summary

Contribute a Gene Snapshot for this gene.

All Summaries

Alliance
Auto summary
Gene Group
Interactive Fly

Key Links

Genomic Location

Cytogenetic map

55D1-55D1

Sequence location

2R:18,514,574..18,526,439 [+]

Recombination map

2-86

RefSeq locus

NT_033778 REGION:18514574..18526439

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (9 terms)

Molecular Function (4 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (4 terms)

CV Term

Evidence

References

enables amino acid:sodium symporter activity

inferred from biological aspect of ancestor with PANTHER:PTN000907238

(GO Reference Genome Project, 2011-)

enables L-amino acid transmembrane transporter activity

inferred from biological aspect of ancestor with PANTHER:PTN002267127

(GO Reference Genome Project, 2011-)

enables neurotransmitter transmembrane transporter activity

inferred from sequence or structural similarity with FLYBASE:DAT; FB:FBgn0034136

(Romero-Calderon et al., 2007)

enables neurotransmitter:sodium symporter activity

inferred from sequence model

(Thimgan et al., 2006)

Biological Process (3 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

involved_in glycine import across plasma membrane

inferred from biological aspect of ancestor with PANTHER:PTN000907238

(GO Reference Genome Project, 2011-)

involved_in neurotransmitter transport

inferred from sequence or structural similarity with FLYBASE:DAT; FB:FBgn0034136

(Romero-Calderon et al., 2007)

inferred from sequence model

(Thimgan et al., 2006)

involved_in sodium ion transmembrane transport

inferred from biological aspect of ancestor with PANTHER:PTN000177662

(GO Reference Genome Project, 2011-)

Cellular Component (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

located_in membrane

inferred from sequence model

(Thimgan et al., 2006)

inferred from electronic annotation with InterPro:IPR000175

(InterPro Project Members, 2004-)

is_active_in plasma membrane

inferred from biological aspect of ancestor with PANTHER:PTN000177662

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

SLC6 FAMILY OF SODIUM/CHLORIDE-DEPENDENT NEUROTRANSMITTER TRANSPORTERS

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

SLC6 FAMILY OF SODIUM/CHLORIDE-DEPENDENT NEUROTRANSMITTER TRANSPORTERS -: Solute carrier family 6 (SLC6) members are Na⁺/Cl^--dependent transporters of extracellular neurotransmitters, amino acids and osmolytes across the plasma membrane into the cytosol. (Adapted from FBrf0193583).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\CG43066 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry A0A0B4K7V4)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.41

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.50

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

CG43066-RA

FBtr0304865

NM_137496

4033

675

CG43066-RC

FBtr0304867

NM_001259479

4472

721

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

CG43066-PA

FBpp0293405

75.1

675

5.69

FBpp0293407

80.4

721

5.25

A0A0B4K7V4

NP_001246408

AFH08161

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\CG43066 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CG43066_1

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.74

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 13 -- 16

embryonic brain

(Fisher et al., 2012)

larval ventral nerve cord

(Fisher et al., 2012)

embryonic central brain glial cell

(Fisher et al., 2012)

embryonic central brain neuron

(Fisher et al., 2012)

embryonic head sensory system

(Fisher et al., 2012)

larval lateral VNC glial cell

(Fisher et al., 2012)

lateral cord neuron

(Fisher et al., 2012)

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

(Romero-Calderon et al., 2007)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

day 5 of adulthood | male -- day 7 of adulthood | male

spermatozoon

(Wasbrough et al., 2010)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\CG43066 in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\CG43066

View exonic expression by tissue for Dmel\CG43066

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0262476

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

37129/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0262476

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0034355

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0262476

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG5226

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 4 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 5 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of CG43066

Transgenic constructs containing regulatory region of CG43066

Aberrations (Deficiencies and Duplications) ( 0 )

Inferred from experimentation ( 0 )

Inferred from location ( 5 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

CG43066^GD2069

viable, with Scer\GAL4^Mef2.PR

CG43066^GD2069

viable, with Scer\GAL4^pnr-MD237

CG43066^GD2069

viable, with Scer\GAL4^tin.CΔ4

CG43066^GD2069

Other Phenotypes

Allele

abnormal locomotor behavior | adult stage, with Scer\GAL4^elav.PLu

abnormal stress response | adult stage, with Scer\GAL4^elav.PLu

Phenotype manifest in

Allele

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (19)

Hsap\SLC6A17

12 of 14

Yes

Hsap\SLC6A15

11 of 14

Yes

Hsap\SLC6A18

7 of 14

Hsap\SLC6A19

7 of 14

Hsap\SLC6A20

5 of 14

Yes

Hsap\SLC6A16

3 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

1 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (21)

Rnor\Slc6a17

12 of 14

Yes

Rnor\Slc6a15

10 of 14

Yes

Rnor\Slc6a18

7 of 14

Rnor\Slc6a19

7 of 14

Rnor\Slc6a20

5 of 14

Yes

Rnor\RGD1562492

3 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

Yes

Rnor\RGD1566368

1 of 14

Yes

Rnor\Slc6a4

1 of 14

Rnor\Slc6a8

1 of 14

Rnor\Slc6a12

1 of 14

Mus musculus (laboratory mouse) (21)

Mmus\Slc6a15

11 of 14

Yes

Mmus\Slc6a17

11 of 14

Yes

Mmus\Slc6a18

7 of 14

Mmus\Slc6a19

7 of 14

Mmus\Slc6a20a

5 of 14

Yes

Mmus\Slc6a20b

5 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

Yes

Mmus\Slc6a21

2 of 14

Yes

Mmus\Slc6a5

1 of 14

Xenopus tropicalis (Western clawed frog) (18)

Xtro\slc6a17

9 of 13

Yes

Xtro\slc6a15

8 of 13

Yes

Xtro\slc6a8

7 of 13

Yes

5 of 13

5 of 13

4 of 13

2 of 13

2 of 13

Yes

Xtro\cdc37

1 of 13

Xtro\cflar

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Danio rerio (Zebrafish) (35)

Drer\slc6a16a

10 of 14

Yes

Drer\slc6a16b

10 of 14

Yes

Drer\slc6a17

10 of 14

Yes

Drer\slc6a15

8 of 14

Yes

Drer\slc6a19a.1

8 of 14

Yes

Drer\slc6a19a.2

8 of 14

Yes

Drer\slc6a19b

8 of 14

Yes

Drer\slc6a18

7 of 14

Drer\si:ch211-117c9.5

2 of 14

Drer\si:ch211-132b12.1

2 of 14

Drer\si:ch211-132b12.2

2 of 14

Drer\si:ch211-132b12.3

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

Drer\si:ch211-132b12.6

1 of 14

Drer\si:ch211-225b11.1

1 of 14

Drer\si:ch211-283g2.1

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (15)

Cele\dat-1

2 of 14

Yes

Cele\F56F4.3

2 of 14

Yes

Cele\mod-5

2 of 14

Yes

Cele\snf-1

2 of 14

Yes

Cele\snf-2

2 of 14

Yes

Cele\snf-3

2 of 14

Yes

Cele\snf-5

2 of 14

Yes

Cele\snf-6

2 of 14

Yes

Cele\snf-7

2 of 14

Yes

Cele\snf-9

2 of 14

Yes

Cele\snf-10

2 of 14

Yes

Cele\snf-11

2 of 14

Yes

Cele\snf-12

2 of 14

Yes

Cele\Y43D4A.1

2 of 14

Yes

Cele\snf-8

1 of 14

Yes

Anopheles gambiae (African malaria mosquito) (22)

Agam\AgaP_AGAP011279

12 of 12

Yes

Agam\AgaP_AGAP000637

5 of 12

Agam\AgaP_AGAP000493

2 of 12

Yes

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

Yes

2 of 12

2 of 12

2 of 12

2 of 12

Yes

Agam\AgaP_AGAP012626

2 of 12

Agam\AgaP_AGAP000494

1 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

Arabidopsis thaliana (thale-cress) (0)

Saccharomyces cerevisiae (Brewer's yeast) (0)

Schizosaccharomyces pombe (Fission yeast) (0)

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:CG43066. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (21)

7 of 13

4 of 13

4 of 13

4 of 13

4 of 13

4 of 13

4 of 13

4 of 13

4 of 13

4 of 13

DAT

4 of 13

Gat

4 of 13

ine

4 of 13

List

4 of 13

NAAT1

4 of 13

Ntl

4 of 13

4 of 13

3 of 13

3 of 13

3 of 13

bdg

2 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 1 )

Human Ortholog

Disease

Evidence

References

SLC6A17; solute carrier family 6 member 17

model of autosomal recessive intellectual developmental disorder 48

IEA

(FlyBase, 2019-)

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

SLC6A17; solute carrier family 6 member 17

12 of 14

610299

INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 48; MRT48

autosomal recessive intellectual developmental disorder 48

SLC6A15; solute carrier family 6 member 15

11 of 14

607971

SLC6A18; solute carrier family 6 member 18

7 of 14

610300

SLC6A19; solute carrier family 6 member 19

7 of 14

608893

HARTNUP DISORDER; HND

Hartnup disease

SLC6A20; solute carrier family 6 member 20

5 of 14

605616

SLC6A16; solute carrier family 6 member 16

3 of 14

607972

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

Summary of Genetic Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

fzr

suppressible

CG43066

(Neuert et al., 2017)

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0262476

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Class of Gene

nuclear_gene

(FlyBase Genome Annotators, 2008)

protein_coding_gene

(FlyBase Genome Annotators, 2008)

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-86

Cytogenetic map

55D1-55D1

Sequence location

2R:18,514,574..18,526,439 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

55D1-55D1

Limits computationally determined from genome sequence between P{lacW}l(2)08770^k04808 and P{EP}EP437

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

2-86

(FlyBase, 2016)

2-90.2

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (15)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

39095

w¹¹¹⁸; P{GMR55A03-GAL4}attP2

604224

w¹¹¹⁸; P{GMR54C04-lexA}attP40

28069

y¹ v¹; P{TRiP.JF02906}attP2

13650

y¹ w^67c23; P{SUPor-P}CG43066^KG00319

75998

w¹¹¹⁸; P{R49A07-p65.AD}attP40; P{R55A03-GAL4.DBD}attP2

87148

w¹¹¹⁸; P{R42B05-p65.AD}attP40; P{R55A03-GAL4.DBD}attP2

87151

w¹¹¹⁸; P{R37D04-p65.AD}attP40; P{R55A03-GAL4.DBD}attP2

88216

w¹¹¹⁸; P{R30A10-p65.AD}attP40; P{R55A03-GAL4.DBD}attP2

Korea

16141

P{GMR54C04-lexA}attP40

5226R-1

v101768

v37183

w¹¹¹⁸; P{GD2069}v37183/CyO

More stocks available...

Genomic Clones (14)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (195)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

RE14652

Other clones

FI03236

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0262476

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0262476

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

New annotation (CG42510) in release 5.13 of the genome annotation.

(FlyBase Genome Annotators, 2008)

Relationship to Other Genes

Source for database merge of

Source for merge of: CG5226 anon-WO0149848.1

(FlyBase, 1996-)

Source for merge of: CG5226 CG42510

(FlyBase Genome Annotators, 2010)

Additional comments

Annotations CG5226 and CG42510 merged as CG43066 in release 5.31 of the genome annotation. No longer annotated as a dicistronic transcript.

(FlyBase Genome Annotators, 2010)

Source for merge of CG5226 anon-WO0149848.1 was sequence comparison ( date:051113 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Nomenclature comments

Etymology

Synonyms and Secondary IDs (7)

Reported As

Symbol Synonym

CG42510

(Wasbrough et al., 2010, FlyBase Genome Annotators, 2008)

CG43006

(Frenkel et al., 2017)

CG43066

(Liang et al., 2024, Mele et al., 2023, Ceder and Fredriksson, 2022, Mayneris-Perxachs et al., 2022, McLaughlin et al., 2021, Cho et al., 2020, Mathiyalagan et al., 2019, Gene Disruption Project members, 2018-, Han et al., 2017, Neuert et al., 2017, Hosono et al., 2015, FlyBase Genome Annotators, 2010)

CG5226

(Neuert et al., 2017, Japanese National Institute of Genetics, 2012.5.21, Khanna et al., 2010, Keleman et al., 2009.8.5, Perkins et al., 2009, FlyBase Genome Annotators, 2008, Miller et al., 2008, Romero-Calderon et al., 2007, Liebl et al., 2006, Thimgan et al., 2006, Philipps et al., 2004)

Slc6a20

(Mayneris-Perxachs et al., 2022)

anon-WO0149848.1

dSlc6a15-a

(Liang et al., 2024)

Name Synonyms

Secondary FlyBase IDs

FBgn0034355
FBgn0045956
FBgn0260236

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 38 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

37129

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

A0A0B4K7V4

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

A0A0B4K7V4

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0262476

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

37129/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0262476

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0262476

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG43066

MARRVEL_MODEL - MARRVEL (model organism gene)

37129

Linkouts

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0262476

DroID - A comprehensive database of gene and protein interactions.

FBgn0262476

DRSC - Results frm RNAi screens

FBgn0262476

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CG43066_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0034355

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0262476

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG5226

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC009753

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

References (52)

The following external sites may use different assemblies or annotations than FlyBase.

-0.74

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