DG1, PKG
Please see the JBrowse view of Dmel\Pkg21D for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.45
2.8 (northern blot)
There is only one protein coding transcript and one polypeptide associated with this gene
768 (aa)
Homodimer.
Autophosphorylated.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Pkg21D using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Pkg21D transcripts are found at all stages of development tested on northern blots. They are found preferentially in heads in adults.
Comment: diffusely localized; expression assayed in cultured cells
JBrowse - Visual display of RNA-Seq signals
View Dmel\Pkg21D in JBrowse
2-1.5
2-0.5
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Isolated from a genomic library using a Pka-C1 probe.
Pkg21D may encode a protein kinase.
Genes in D.melanogaster encoding products related (by sequence comparison) to cGMP-dependent protein kinases of mammals have been isolated by using a Drosophila cAMP-dependent protein kinase catalytic subunit gene as a probe.
Encodes a product with putative cGMP-dependent binding and kinase domains that is 14% larger than the corresponding mammalian enzyme. It is believed to bind cGMP and to undergo changes enabling its catalytic site to interact with appropriate substrates. This gene is unusually polymorphic in various Drosophila stocks.
Source for identity of: Pkg21D CG3324