FlyBase Gene Report: Dmel\tHMG2

General Information

Symbol

Dmel\tHMG2

Species

D. melanogaster

Name

testis-enriched HMG-box-containing protein 2

Annotation Symbol

CG7046

Feature Type

protein_coding_gene

FlyBase ID

FBgn0038979

Gene Model Status

Current

Stock Availability

11 publicly available

Gene Summary

testis-enriched HMG-box-containing protein 2 (tHMG2) encodes a chromosomal protein involved in spermatogenesis. [Date last reviewed: 2019-03-14] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Gene Group
Interactive Fly

Key Links

Genomic Location

Cytogenetic map

94B1-94B1

Sequence location

3R:22,492,953..22,493,746 [+]

Recombination map

3-75

RefSeq locus

NT_033777 REGION:22492953..22493746

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (4 terms)

Molecular Function (0 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (0 terms)

Biological Process (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

involved_in chromatin remodeling

inferred from biological aspect of ancestor with PANTHER:PTN009229167

(GO Reference Genome Project, 2011-)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

located_in cytoplasm

inferred from direct assay

(Gärtner et al., 2015)

located_in nucleus

inferred from direct assay

(Gärtner et al., 2015)

located_in polytene chromosome interband

inferred from direct assay

(Gärtner et al., 2015)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

is_active_in nucleus

inferred from biological aspect of ancestor with PANTHER:PTN008733575

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

HIGH MOBILITY GROUP BOX TRANSCRIPTION FACTORS

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

testis-enriched HMG-box-containing protein 2 (tHMG2) encodes a chromosomal protein involved in spermatogenesis. [Date last reviewed: 2019-03-14]

Gene Group (FlyBase)

HIGH MOBILITY GROUP BOX TRANSCRIPTION FACTORS -: The High mobility group box (HMGB) transcription factors are sequence-specific DNA binding proteins that regulate transcription. The HMGB proteins have a characteristic L-shaped HMGB domain of about 80 amino acid residues, which binds the DNA minor groove and induce DNA bending. The HMGB domains are found in one or more copies and are involved in the regulation of DNA-dependent processes such as transcription, replication and chromatin remodeling. (Adapted from FBrf0194706, FBrf0108466, PMID:24086078 and PMID:23153957).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\tHMG2 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry E1JIT5)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.47

Variant in sequenced strain: isoform with 5 additional amino acids in region carboxy to the HMG box is found in other strains and in close species; see cDNA AT28425 (GB acc. AY070828).

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

tHMG2-RA

FBtr0084259

NM_142799

588

133

tHMG2-RB

FBtr0301483

NM_001170218

550

134

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

tHMG2-PA

FBpp0083652

15.5

133

9.17

FBpp0290698

15.6

134

9.17

E1JIT5

NP_001163689

ACZ94985

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\tHMG2 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

5.09

Transcript Expression

RT-PCR

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage | male

testis

(Gärtner et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

immunolocalization

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage | male

spermatocyte

(Gärtner et al., 2015)

spermatid

(Gärtner et al., 2015)

Additional Descriptive Data

tHMG2 protein is detected in nuclei from the round spermatid stage to late canoe stage in a spotted pattern.

(Gärtner et al., 2015)

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in cytoplasm

inferred from direct assay

(Gärtner et al., 2015)

located_in nucleus

inferred from direct assay

(Gärtner et al., 2015)

located_in polytene chromosome interband

inferred from direct assay

(Gärtner et al., 2015)

Expression Deduced from Reporters

Reporter: P{tHMG2-eGFP}

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage | male

spermatocyte

(Gärtner et al., 2015)

spermatid

(Gärtner et al., 2015)

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\tHMG2 in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\tHMG2

View exonic expression by tissue for Dmel\tHMG2

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0038979

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

42651/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0038979

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0038979

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0038979

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG7046

Flygut - An atlas of the Drosophila adult midgut

FBgn0038979

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 1 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 14 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of tHMG2

Transgenic constructs containing regulatory region of tHMG2

Aberrations (Deficiencies and Duplications) ( 2 )

Inferred from experimentation ( 2 )

Gene disrupted in

Df(3R)Exel6191

(Ryder, 2004.4.26)

Gene partially disrupted in

Df(3R)ΔtHMG1-2

(Gärtner et al., 2015)

Inferred from location ( 6 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable, with Scer\GAL4^Mef2.PR

tHMG2^GD4118

Other Phenotypes

Allele

visible, with Scer\GAL4^Bx-MS1096

tHMG2^{UAS.ORF.GW.Tag:HA}

visible | cold sensitive, with Scer\GAL4^Bx-MS1096

tHMG2^{UAS.ORF.GW.Tag:HA}

Phenotype manifest in

Allele

wing, with Scer\GAL4^Bx-MS1096

tHMG2^{UAS.ORF.GW.Tag:HA}

wing | cold sensitive, with Scer\GAL4^Bx-MS1096

tHMG2^{UAS.ORF.GW.Tag:HA}

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (37)

Hsap\HMGB1

3 of 14

Yes

Hsap\HMGB2

3 of 14

Yes

Hsap\HMGB3

3 of 14

Yes

Hsap\TFAM

3 of 14

Yes

Hsap\HBP1

2 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (33)

Rnor\Hmgb2

3 of 14

Yes

Rnor\LOC108350839

3 of 14

Yes

Rnor\RGD1559962

3 of 14

Yes

Rnor\Tfam

3 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Rnor\LOC691030

1 of 14

Rnor\LOC103690904

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Mus musculus (laboratory mouse) (20)

Mmus\Hmgb1

3 of 14

Yes

Mmus\Hmgb2

3 of 14

Yes

Mmus\Hmgb3

3 of 14

Yes

Mmus\Tfam

3 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Xenopus tropicalis (Western clawed frog) (30)

Xtro\hbp1

2 of 13

Yes

Xtro\hmgb1

2 of 13

Yes

Xtro\hmgb2

2 of 13

Yes

Xtro\hmgb3

2 of 13

Yes

Xtro\hmgxb4

2 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Danio rerio (Zebrafish) (27)

Drer\hmgb1b

3 of 14

Yes

Drer\hmgb2a

3 of 14

Yes

Drer\hmgb3a

3 of 14

Yes

Drer\hmgb3b

3 of 14

Yes

Drer\tfam

3 of 14

Yes

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (16)

Cele\hmg-1.1

4 of 14

Yes

Cele\egl-13

2 of 14

Cele\hmg-1.2

2 of 14

Cele\B0238.11

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Anopheles gambiae (African malaria mosquito) (19)

Agam\AgaP_AGAP008499

3 of 12

Yes

Agam\AgaP_AGAP012334

3 of 12

Yes

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Arabidopsis thaliana (thale-cress) (15)

Atha\HMGB1

4 of 13

Yes

Atha\HMGB2

4 of 13

Yes

Atha\HMGB3

4 of 13

Yes

Atha\HMGB4

4 of 13

Yes

Atha\HMGB5

4 of 13

Yes

Atha\HMGB6

4 of 13

Yes

3 of 13

3 of 13

3 of 13

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Saccharomyces cerevisiae (Brewer's yeast) (6)

Scer\ABF2

4 of 13

Yes

3 of 13

3 of 13

2 of 13

2 of 13

2 of 13

Schizosaccharomyces pombe (Fission yeast) (4)

Spom\nhp6

3 of 12

Yes

Spom\cmb1

1 of 12

Spom\nht1

1 of 12

Yes

Spom\SPBC28F2.11

1 of 12

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:tHMG2. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (17)

7 of 13

5 of 13

5 of 13

2 of 13

2 of 13

2 of 13

2 of 13

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 2 )

Human Ortholog

Disease

Evidence

References

HMGB3; high mobility group box 3

model of syndromic microphthalmia 13

IEA

(FlyBase, 2019-)

TFAM; transcription factor A, mitochondrial

model of mitochondrial DNA depletion syndrome 15

IEA

(FlyBase, 2019-)

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

HMGB1; high mobility group box 1

3 of 14

163905

HMGB2; high mobility group box 2

3 of 14

163906

HMGB3; high mobility group box 3

3 of 14

300193

MICROPHTHALMIA, SYNDROMIC 13; MCOPS13

syndromic microphthalmia 13

TFAM; transcription factor A, mitochondrial

3 of 14

600438

MITOCHONDRIAL DNA DEPLETION SYNDROME 15 (HEPATOCEREBRAL TYPE); MTDPS15

mitochondrial DNA depletion syndrome 15

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

tHMG2

bimolecular fluorescence complementation

(Gärtner et al., 2015)

tHMG2 - Asciz

two hybrid array

(Shokri et al., 2019)

tHMG2 - CG10654

two hybrid array

(Shokri et al., 2019)

tHMG2 - CG8319

two hybrid array

(Shokri et al., 2019)

tHMG2 - Hr78

two hybrid array

(Shokri et al., 2019)

tHMG2 - tHMG1

bimolecular fluorescence complementation

(Gärtner et al., 2015)

Summary of Genetic Interactions

Interaction Browsers

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

67606

DroID - A comprehensive database of gene and protein interactions.

FBgn0038979

MIST (protein-protein) - An integrated Molecular Interaction Database

42651

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

Class of Gene

nuclear_gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-75

Cytogenetic map

94B1-94B1

Sequence location

3R:22,492,953..22,493,746 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

94B1-94B1

Limits computationally determined from genome sequence between P{PZ}l(3)rQ178^rQ178 and P{lacW}Dph5^L4910

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

3-75

(FlyBase, 2016)

3-77.6

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (11)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

74610

w¹¹¹⁸; P{VT045783-GAL4.DBD}attP2

28657

y¹ v¹; P{TRiP.JF03072}attP2

14220

y¹ w^*; ry⁵⁰⁶ P{SUPor-P}tHMG2^KG05938

81674

y¹ sc^* v¹ sev²¹; P{TOE.GS02732}attP40

FlyORF

F003387

M{UAS-tHMG2.ORF-CC}ZH-21F

F000266

M{UAS-tHMG2.ORF.3xHA.GW}ZH-86Fb

Korea

12499

P{VT045783-GAL4}attP2

15829

P{VT045783-lexA::GADfl}attP40

VDRC

v103453

P{KK113359}VIE-260B

v50444

w¹¹¹⁸; P{GD17295}v50444

v342527

P{hsFLP}1, y¹ w¹¹¹⁸; P{HD_CFD02071}attP40/CyO-GFP

Genomic Clones (23)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (9)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

AT28425

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0038979

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0038979

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Gärtner et al., 2015)

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

tHMG1 and tHMG2 most likely arose by gene duplication.

(Gärtner et al., 2015)

Relationship to Other Genes

Source for database merge of

Source for merge of: CG7046 BcDNA:AT28425

(Rana, 2004.7.2)

Additional comments

Nomenclature History

Source for database identify of

Source for identity of: tHMG2 CG7046

(Gärtner et al., 2015)

Nomenclature comments

Etymology

Synonyms and Secondary IDs (7)

Reported As

Symbol Synonym

BcDNA:AT28425

CG7046

(Lee et al., 2024, Xia et al., 2021, Bischof et al., 2018, Kwon et al., 2016, Lefebvre et al., 2016, Doyen et al., 2015, Gärtner et al., 2015, Chen et al., 2012, Ibrahim et al., 2011, Ou et al., 2011, Zhang et al., 2010, Keleman et al., 2009.8.5, Perkins et al., 2009)

tHMG-2

(Gärtner et al., 2015)

tHMG2

(Shokri et al., 2019, Transgenic RNAi Project members, 2017-, Doyen et al., 2015, Schertel et al., 2015)

thmg-2

(Gärtner et al., 2015)

Name Synonyms

testis-enriched HMG-box-containing protein 2

testis-enriched HMG-box-containing protein-2

(Gärtner et al., 2015)

Secondary FlyBase IDs

FBgn0047326

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 38 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

42651

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

E1JIT5

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

E1JIT5

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0038979

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

42651/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0038979

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0038979

FlyMine - An integrated database for Drosophila genomics

FBgn0038979

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG7046

MARRVEL_MODEL - MARRVEL (model organism gene)

42651

Linkouts

BioGRID - A database of protein and genetic interactions.

67606

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0038979

DroID - A comprehensive database of gene and protein interactions.

FBgn0038979

DRSC - Results frm RNAi screens

FBgn0038979

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0038979

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0038979

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG7046

Flygut - An atlas of the Drosophila adult midgut

FBgn0038979

MIST (protein-protein) - An integrated Molecular Interaction Database

42651

References (43)

The following external sites may use different assemblies or annotations than FlyBase.

5.09

Report Sections