FlyBase Gene Report: Dmel\cm

General Information

Symbol

Dmel\cm

Species

D. melanogaster

Name

carmine

Annotation Symbol

CG3035

Feature Type

protein_coding_gene

FlyBase ID

FBgn0000330

Gene Model Status

Current

Stock Availability

32 publicly available

Gene Summary

Contribute a Gene Snapshot for this gene.

All Summaries

Alliance
Auto summary
Gene Group
Red Book
Interactive Fly

Also Known As

μ3, AP-3, AP-3μ, AP3μ3, apm3

Key Links

Genomic Location

Cytogenetic map

6E4-6E4

Sequence location

X:7,009,006..7,011,145 [-]

Recombination map

1-18

RefSeq locus

NC_004354 REGION:7009006..7011145

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (12 terms)

Molecular Function (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

enables cargo adaptor activity

inferred from sequence or structural similarity with FLYBASE:AP-1μ; FB:FBgn0024833

(Gene Ontology Curators, 2002-)

inferred from sequence or structural similarity with FLYBASE:AP-2μ; FB:FBgn0263351

(Gene Ontology Curators, 2002-)

enables clathrin-cargo adaptor activity

inferred from biological aspect of ancestor with PANTHER:PTN000055849

(GO Reference Genome Project, 2011-)

Biological Process (7 terms)

Terms Based on Experimental Evidence (4 terms)

CV Term

Evidence

References

involved_in determination of adult lifespan

inferred from mutant phenotype

(Simonsen et al., 2007)

involved_in endocytosis

inferred from mutant phenotype

(Wilkin et al., 2008)

involved_in exocytosis

inferred from mutant phenotype

(Asensio et al., 2010)

involved_in Notch receptor processing

inferred from mutant phenotype

(Wilkin et al., 2008)

Terms Based on Predictions or Assertions (4 terms)

CV Term

Evidence

References

involved_in endocytosis

inferred from biological aspect of ancestor with PANTHER:PTN002237676

(GO Reference Genome Project, 2011-)

involved_in Golgi to vacuole transport

inferred from biological aspect of ancestor with PANTHER:PTN000055849

(GO Reference Genome Project, 2011-)

involved_in intracellular protein transport

inferred from electronic annotation with InterPro:IPR001392, InterPro:IPR018240

(InterPro Project Members, 2004-)

involved_in vesicle-mediated transport

inferred from electronic annotation with InterPro:IPR001392, InterPro:IPR018240

(InterPro Project Members, 2004-)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

part_of AP-3 adaptor complex

non-traceable author statement

(Boehm and Bonifacino, 2001)

inferred from biological aspect of ancestor with PANTHER:PTN002237676

(GO Reference Genome Project, 2011-)

part_of clathrin adaptor complex

inferred from electronic annotation with InterPro:IPR001392, InterPro:IPR018240

(InterPro Project Members, 2004-)

is_active_in trans-Golgi network

inferred from biological aspect of ancestor with PANTHER:PTN000055849

(GO Reference Genome Project, 2011-)

Gene Group (FlyBase)

ADAPTOR PROTEIN COMPLEX 3

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

ADAPTOR PROTEIN COMPLEX 3 -: Adaptor protein (AP) complexes select cargo for inclusion into coated vesicles in the late secretory and endocytic pathways. AP complexes are heterotetramers. AP-3 is associated with endosomes and, to a less extent, the trans-Golgi network and appears to function independently of clathrin. Drosophila AP-3 genes were first linked to defects in the biogenesis of visual pigment granules. (Adapted from FBrf0129983 and PMID:15066634).

Phenotypic Description (Red Book; Lindsley and Zimm 1992)

cm: carmine

Eye color translucent dark ruby. With st, eye color deep orange; with brown, slightly lighter than bw alone. Larval Malpighian tubes very pale yellow. RK1.

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\cm for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry O76928)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.45

Gene model reviewed during 5.52

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

cm-RA

FBtr0071033

NM_176700

1469

415

cm-RB

FBtr0332315

NM_001272373

1774

415

Additional Transcript Data and Comments

Reported size (kB)

1.455 (sequence analysis)

(Mullins et al., 1999)

1.476 (sequence analysis)

(Zhang and Broadie, 1999)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

cm-PA

FBpp0070992

46.8

415

8.19

FBpp0304594

46.8

415

8.19

O76928

NP_001259302

AGB95147

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

415 aa isoforms: cm-PA, cm-PB

Additional Polypeptide Data and Comments

Reported size (kDa)

415 (aa)

(Mullins et al., 1999, Zhang and Broadie, 1999)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

O76928

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\cm using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

cm_1

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.46

Transcript Expression

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage -- adult stage

(Mullins et al., 1999)

Additional Descriptive Data

cm transcripts are detected at all stages of development tested.

(Mullins et al., 1999)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\cm in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\cm

View exonic expression by tissue for Dmel\cm

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

31647/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0000330

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0000330

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0000330

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG3035

Flygut - An atlas of the Drosophila adult midgut

FBgn0000330

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 12 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 4 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of cm

Transgenic constructs containing regulatory region of cm

Aberrations (Deficiencies and Duplications) ( 37 )

Inferred from experimentation ( 37 )

Gene duplicated in

Dp(1;3)ct^11a

Dp(1;3)ct^268-37

(Demerec, 1940)

Dp(1;3)DC166

(Popodi et al., 2010-, Venken et al., 2010)

Dp(1;3)DC489

(Popodi et al., 2010-)

Dp(1;3)sn^13a1

(Cline, 1983, Lefevre, 1981, Lefevre and Johnson, 1973)

Dp(1;Y)ct⁺y⁺

(Nicklas and Cline, 1983, Johnson and Judd, 1979)

Tp(1;2)sn⁺72d

(Lefevre, 1981)

Gene not duplicated in

Dp(1;2)ct^7c1

Dp(1;2)sn⁺72d

(Nicklas and Cline, 1983)

Dp(1;f)q2

Inferred from location ( 9 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal, with Scer\GAL4^Act5C.PU

cm^GD10049

lethal, with Scer\GAL4^insc-Mz1407

cm^GD10049

lethal - all die before end of larval stage | recessive

cm⁵

lethal - all die during P-stage, with Scer\GAL4^Mef2.PR

cm^GD10049

viable

cm^f05774

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

cm^GD10049

viable, with Scer\GAL4^pnr-MD237

cm^GD10049

viable, with Scer\GAL4^tin.CΔ4

cm^GD10049

Sterility

Allele

fertile

cm^f05774

Other Phenotypes

Allele

abnormal eye color

abnormal eye color | recessive

abnormal neuroanatomy | larval stage, with Scer\GAL4^insc-Mz1407

cm^GD10049

short lived | male

cm¹

some die during larval stage | recessive

cm⁵

visible, with Scer\GAL4^pnr-MD237

cm^GD10049

visible | recessive

cm¹

Phenotype manifest in

Allele

eye, with Scer\GAL4^GMR.PF, Scer\GAL4^ey.PH

cm^GD10049

ganglion mother cell | larval stage, with Scer\GAL4^insc-Mz1407

cm^GD10049

Malpighian tubule

cm¹

mesonotum, with Scer\GAL4^pnr-MD237

cm^GD10049

ommatidium

cm¹

photoreceptor neuron

cm¹

pigment cell

rhabdomere

cm¹

secondary pigment cell pigment granule

cm¹

tertiary pigment cell pigment granule

cm¹

wing, with Scer\GAL4^Bx-MS1096

cm^GD10049

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (12)

Hsap\AP3M2

14 of 14

Yes

Hsap\AP3M1

12 of 14

Yes

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (6)

Rnor\Ap3m2

14 of 14

Yes

Rnor\Ap3m1

12 of 14

Yes

2 of 14

1 of 14

1 of 14

1 of 14

Mus musculus (laboratory mouse) (6)

Mmus\Ap3m2

13 of 14

Yes

Mmus\Ap3m1

12 of 14

Yes

2 of 14

1 of 14

1 of 14

1 of 14

Xenopus tropicalis (Western clawed frog) (6)

Xtro\ap3m2

11 of 13

Yes

Xtro\ap2m1

2 of 13

Xtro\ap4m1

1 of 13

Yes

Xtro\arcn1

1 of 13

Xtro\lmbr1

1 of 13

Xtro\ston1

1 of 13

Danio rerio (Zebrafish) (8)

Drer\ap3m2

14 of 14

Yes

Drer\ap3m1

11 of 14

Yes

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (6)

Cele\apm-3

12 of 14

Yes

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Anopheles gambiae (African malaria mosquito) (4)

Agam\AgaP_AGAP001484

12 of 12

Yes

Agam\AgaP_AGAP007131

2 of 12

Agam\AgaP_AGAP000363

1 of 12

Agam\AgaP_AGAP011374

1 of 12

Arabidopsis thaliana (thale-cress) (7)

Atha\ZIP4

13 of 13

Yes

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Saccharomyces cerevisiae (Brewer's yeast) (6)

Scer\APM3

4 of 13

Yes

2 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Schizosaccharomyces pombe (Fission yeast) (3)

Spom\apm3

5 of 12

Yes

Spom\apm4

2 of 12

Spom\apm1

1 of 12

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:cm. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (3)

AP-1μ

3 of 13

AP-2μ

3 of 13

stnB

3 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

retinal degeneration, excessive endocytosis of rhodopsin

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 1 )

Allele

Disease

Interaction

References

cm¹

exacerbates Hermansky-Pudlak syndrome

modeled by Blos1^ex2

(Cheli et al., 2010)

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

AP3M2; adaptor related protein complex 3 subunit mu 2

14 of 14

610469

AP3M1; adaptor related protein complex 3 subunit mu 1

12 of 14

610366

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

Interaction Browsers

Summary of Genetic Interactions

Interaction Browsers

View in FlyBase Interactions Browser View in MIST tool (external link)

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

enhanceable

Blos1

(Cheli et al., 2010)

enhanceable

(Lloyd et al., 2002)

suppressible

w|Vps26

(Wang et al., 2014)

suppressible

w|Vps35

(Wang et al., 2014)

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Blos1

enhanceable

(Cheli et al., 2010)

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

58125

DroID - A comprehensive database of gene and protein interactions.

FBgn0000330

MIST (genetic) - An integrated Molecular Interaction Database

31647

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyBase

External Links

External Data

Linkouts

KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.

Lysosome

SignaLink - A signaling pathway resource with multi-layered regulatory networks.

O76928

Class of Gene

nuclear_gene

protein_coding_gene

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

1-18

Cytogenetic map

6E4-6E4

Sequence location

X:7,009,006..7,011,145 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

6E4-6E4

Limits computationally determined from genome sequence between P{EP}inx7^EP1641 and P{EP}CG9650^EP1340&P{EP}CG9650^EP1617

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

6E-6E

(Lloyd et al., 2000, Zhang, 1998.7.17)

6E1-6E4

(determined by in situ hybridisation)

(Zhang and Broadie, 1999)

Determined by comparing Celera genomic sequence with sequence from BDGP BAC and P1 clones.

(Lloyd et al., 2000)

Experimentally Determined Recombination Data

Location

1-18

(FlyBase, 2016)

1-20.4

(Comeron et al., 2012)

1-18.9

(Nicklas and Cline, 1983)

1-18.8

(Neel, 1942)

Left of (cM)

(Johnson and Judd, 1979)

Right of (cM)

stout

(Nicklas and Cline, 1983)

Notes

Stocks and Reagents

Stocks (32)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

cm¹

cm¹ ct⁶

4679

cm¹ l(1)7Dd⁴/FM7a

18905

w¹¹¹⁸ PBac{WH}cm^f05774

3169

cm¹ ct⁶ mys^ts1

27282

y¹ v¹; P{TRiP.JF02594}attP2

58490

y¹ w¹ cm¹ Sxl^f18; P{Sxl.+tCa}9A

Kyoto

105681

cm¹

106890

cm¹ ct⁶ mys^ts1

3035R-1

v110746

v21139

w¹¹¹⁸; P{GD10049}v21139

More stocks available...

Genomic Clones (19)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (13)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

LD09732

Other clones

DPiM_LD09732

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0000330

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0000330

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R⁺ cell morphology.

(Kiger et al., 2003)

hobo dysgenesis causes instability at the cm locus, in progeny derived from the unstable chromosome U-7 line. Once cm mutations are produced they are genetically stable and do not revert. Cytological analysis suggests that the mutations involve minute structural aberrations, and molecular analysis revealed that many result from the deletion of DNA between two hobos.

(Sheen et al., 1993)

Lesions in cm reduce or eliminate pigmentation in the eyes and ocelli and block pigmentation of the fat body and tubules: cm is required for normal pigmentation of all four tissues.

(Tearle, 1991)

Relationship to Other Genes

Source for database merge of

Source for merge of: cm Mu3

(Mullins et al., 1999)

Source for merge of: cm AP-3

(FlyBase, 1996-)

Additional comments

Source for merge of cm AP-3 was sequence comparison ( date:991227 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Nomenclature comments

Etymology

Synonyms and Secondary IDs (17)

Reported As

Symbol Synonym

AP-3

(Lewin and Mellman, 1998, Mullins, 1998.12.1)

AP-3μ

(Hodgson et al., 2024, Bonifacino et al., 2012.12.21)

AP3μ3

(Kametaka et al., 2012, Burgess et al., 2011)

CG3035

(Keleman et al., 2009.8.5, Lebo et al., 2009, Boehm, 2001, Verstreken and Bellen, 2000.9.4)

CG32731

Dμ3

(Jullien-Flores et al., 2000)

Mu3

ap-3

(Asensio et al., 2010)

apm3

(Neumann et al., 2010, Neumann et al., 2010)

cg3035

(Boehm and Bonifacino, 2002)

l(1)VEM119

mu3

(Zhang, 1998.7.17)

μ3

(Kametaka et al., 2012, Boehm and Bonifacino, 2001, Mullins et al., 1999, Mullins et al., 1999, Zhang and Broadie, 1999)

Name Synonyms

Adaptor Protein complex 3, μ subunit

(Bonifacino et al., 2012.12.21)

Carmine

(Gupta et al., 2014)

carmine

(Salazar and Yamamoto, 2018, Wang et al., 2014, Evans and Cline, 2013, Kinser and Dolph, 2012, Bartlett et al., 2011, Burgess et al., 2011, Kametaka et al., 2010, Chinchore et al., 2009, Lebo et al., 2009, Anaka et al., 2008, Wilkin et al., 2008, Falcon-Perez et al., 2007, Simonsen et al., 2007, Muraro and Moffat, 2006)

Secondary FlyBase IDs

FBgn0020512
FBgn0024949

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 45 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

31647

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

O76928

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

O76928

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

O76928

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

31647/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0000330

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0000330

FlyMine - An integrated database for Drosophila genomics

FBgn0000330

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG3035

MARRVEL_MODEL - MARRVEL (model organism gene)

31647

Linkouts

BioGRID - A database of protein and genetic interactions.

58125

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0000330

DroID - A comprehensive database of gene and protein interactions.

FBgn0000330

DRSC - Results frm RNAi screens

FBgn0000330

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

cm_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0000330

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0000330

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG3035

Flygut - An atlas of the Drosophila adult midgut

FBgn0000330

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC011059

KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.

Lysosome

MIST (genetic) - An integrated Molecular Interaction Database

31647

SignaLink - A signaling pathway resource with multi-layered regulatory networks.

O76928

References (108)

The following external sites may use different assemblies or annotations than FlyBase.

-0.46

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