FB2026_03 , released September 17, 2026
Human Disease Model Report: intellectual disability, syndromic, with renal and cardiac dysfunction, ADD3-KAT2B-related
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General Information
Name
intellectual disability, syndromic, with renal and cardiac dysfunction, ADD3-KAT2B-related
FlyBase ID
FBhh0000941
Disease Ontology Term
Parent Disease
OMIM
Overview

This report describes an inherited syndromic disease postulated to be caused by more than one pathogenic mutation: one in the ADD3 gene and a second in the KAT2B gene. Comparing to patients with ADD3 mutational lesions only (see FBhh0000647), additional renal and cardiac phenotypes were postulated to be due to KAT2B dysfunction. The KAT2B protein functions as a histone acetyltransferase to promote transcriptional activation. There is a single orthologous gene in Drosophila, Gcn5, for which multiple genetic reagents, including classical loss-of-function mutations, RNAi targeting constructs, and alleles caused by insertional mutagenesis, have been generated. Dmel\Gcn5 is orthologous to a second gene in human, KAT2A.

UAS-wild-type constructs of human Hsap\KAT2B and Hsap\KAT2A have been introduced into flies. Expression of human KAT2A and KAT2B, either alone or in combination, fails to rescue the lethal phenotype of an amorphic mutation of Dmel\Gcn5.

Animals hemizygous for an amorphic mutation of Dmel\Gcn5 die during late larval or early pupal stages. Animals with reduced levels of Dmel\Gcn5 exhibit mild cardiac dysfunction and renal defects. When expressed ubiquitously, overexpression of wild-type Gcn5 rescues the lethal phenotype. A Dmel\Gcn5 gene carrying a mutational lesion analogous to the KAT2B variant implicated in this disease effects only partial rescue, suggesting that the variant is a hypomorphic mutation. See the 'Disease-Implicated Variants' table below.

Based on genetic interactions of Gcn5 and hts (the fly ortholog of ADD3), it is postulated that the two genes synergistically affect renal function in this disease.

[updated Apr. 2024 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: intellectual disability, syndromic, with renal and cardiac dysfunction, ADD3-KAT2B-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype

Six individuals in three families with intellectual disability and varying degrees of microcephaly were studied. Individuals from family A and B also shared bilateral cataracts, corpus callosum defects as well as specific skeletal defects such as shortening of the third and fourth metatarsals; the affected boy from family C suffered from epilepsy, severe speech delay and suspected cerebral palsy. Individuals in family A also exhibited cardiomyopathy and steroid-resistant nephrotic syndrome (SRNS). (Goncalves et al., 2018, pubmed:29768408; FBrf0239084).

Genetics

Homozygous or compound heterozygous mutations in the ADD3 gene were detected in each of the affected individuals. In individuals from family A, a homozygous missense mutation in the KAT2B gene was also detected (Goncalves et al., 2018, pubmed:29768408; FBrf0239084).

Cellular phenotype and pathology
Molecular information

ADD3 encodes an adducin gamma subunit; it is a membrane-cytoskeleton-associated protein that promotes the assembly of the spectrin-actin network and plays a role in actin filament capping. [Gene Cards, ADD3; 2018.12.18]

The KAT2B protein functions as a histone acetyltransferase (HAT) to promote transcriptional activation; has significant histone acetyltransferase activity with core histones (H3 and H4) and with nucleosome core particles, as well as with some non-histone proteins. [Gene Cards, KAT2B; 2018.12.18]

External links
Disease synonyms
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
Symbol / Name
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: 3 human to 1 Drosophila. The 3 human genes are ADD3, ADD1, and ADD2.

Human gene (HGNC)
D. melanogaster ortholog (based on DIOPT)
Comments on ortholog(s)

Many to one: 2 human to 1 Drosophila; the second human gene is KAT2A.

Other mammalian ortholog(s) used
    D. melanogaster Gene Information (2)
    Gene Snapshot
    Gcn5 acetyltransferase (Gcn5) encodes a lysine acetyltransferase subunit of several chromatin modifying complexes. It contributes to oogenesis and metamorphosis. [Date last reviewed: 2019-08-01]
    Gene Groups / Pathways
    Comments on ortholog(s)

    High-scoring ortholog of human KAT2B and KAT2A (1 Drosophila to 2 human). Dmel\Gcn5 shares 46-48% identity and 64-66% similarity with the human genes.

    Orthologs and Alignments from DRSC
    DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
    Gene Snapshot
    hu li tai shao (hts) encodes an adducin homolog that is associated with the plasma membrane cytoskeleton, fusome and oocyte ring canals. It has essential functions in muscle, nerve and other tissues, and is required for fertility in males and females. [Date last reviewed: 2019-03-07]
    Molecular function (GO)
    Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human ADD3, ADD1, and ADD2 (1 Drosophila to 3 human). Dmel\hts shares 33-35% identity and 49-53% similarity with the human genes.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (58 groups)
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, molecular sieving, peptide massfingerprinting, western blot, anti bait coimmunoprecipitation, ion exchange chromatography, two hybrid
        anti tag coimmunoprecipitation, western blot, anti bait coimmunoprecipitation, molecular sieving, anti tag western blot, peptide massfingerprinting, pull down, autoradiography, affinity chromatography technology, multidimensional protein identification technology, ion exchange chromatography, two hybrid
        anti tag coimmunoprecipitation, western blot, peptide massfingerprinting, anti bait coimmunoprecipitation, experimental knowledge based
        anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based, western blot, anti bait coimmunoprecipitation
        anti tag coimmunoprecipitation, peptide massfingerprinting, molecular sieving, western blot, experimental knowledge based
        anti tag coimmunoprecipitation, western blot, peptide massfingerprinting
        anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot, pull down, multidimensional protein identification technology, two hybrid, anti tag western blot
        anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot
        anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        pull down, autoradiography, anti bait coimmunoprecipitation, anti tag western blot
        pull down, autoradiography
        experimental knowledge based
        molecular sieving, western blot, anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        experimental knowledge based
        anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, anti tag western blot
        pull down, western blot, anti bait coimmunoprecipitation
        anti bait coimmunoprecipitation, western blot
        experimental knowledge based
        experimental knowledge based
        experimental knowledge based
        pull down, autoradiography, anti bait coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, western blot, anti bait coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti bait coimmunoprecipitation, western blot
        ion exchange chromatography, molecular sieving, western blot
        ion exchange chromatography, molecular sieving, western blot
        anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        molecular sieving, western blot, experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting
        protein-protein
        Interacting group
        Assay
        References
        proximity ligation assay, fluorescence microscopy, proximity-dependent biotin identification, Identification by mass spectrometry, western blot, anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, Identification by mass spectrometry
        proximity-dependent biotin identification, Identification by mass spectrometry
        proximity-dependent biotin identification, Identification by mass spectrometry, proximity ligation assay, fluorescence microscopy
        proximity-dependent biotin identification, Identification by mass spectrometry
        anti tag coimmunoprecipitation, western blot, Identification by mass spectrometry
        anti bait coimmunoprecipitation, western blot, proximity ligation assay, fluorescence microscopy
        anti tag coimmunoprecipitation, Identification by mass spectrometry, anti tag western blot
        proximity-dependent biotin identification, western blot, tandem affinity purification, Identification by mass spectrometry, proximity ligation assay, fluorescence microscopy
        proximity-dependent biotin identification, Identification by mass spectrometry
        pull down, molecular weight estimation by staining
        pull down, molecular weight estimation by staining
        pull down, western blot, Identification by mass spectrometry, autoradiography
        anti tag coimmunoprecipitation, Identification by mass spectrometry
        RNA-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, quantitative reverse transcription pcr, full identification by DNA sequencing
        Alleles Reported to Model Human Disease (Disease Ontology) (15 alleles)
        Models Based on Experimental Evidence ( 3 )
        Modifiers Based on Experimental Evidence ( 3 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 7 )
        Modifiers Based on Experimental Evidence ( 3 )
        Models Based on Experimental Evidence ( 1 )
        Modifiers Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Interaction
        References
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        loss of function allele
        P-element activity
        amorphic allele - molecular evidence
        FLPase
        References (5)