FB2026_02 , released June 18, 2026
FB2026_02 , released June 18, 2026
Gene: Dmel\Msp300
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General Information
Symbol
Dmel\Msp300
Species
D. melanogaster
Name
Muscle-specific protein 300 kDa
Annotation Symbol
CG42768
Feature Type
FlyBase ID
FBgn0261836
Gene Model Status
Stock Availability
Gene Summary
Muscle-specific protein 300 kDa (Msp300) encodes a Nesprin-like protein that is required for proper positioning of muscle nuclei, mitochondria, and neuromuscular junction. [Date last reviewed: 2019-03-14] (FlyBase Gene Snapshot)
Also Known As

Msp-300, nesprin, Muscle-specific protein 300, jf22

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
2-15
RefSeq locus
NT_033779 REGION:5100877..5207002
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (28 terms)
Molecular Function (4 terms)
Terms Based on Experimental Evidence (3 terms)
CV Term
Evidence
References
inferred from direct assay
inferred from physical interaction with FLYBASE:klar; FB:FBgn0001316
inferred from physical interaction with FLYBASE:sls; FB:FBgn0086906
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
inferred from biological aspect of ancestor with PANTHER:PTN002934743
Biological Process (15 terms)
Terms Based on Experimental Evidence (14 terms)
CV Term
Evidence
References
inferred from mutant phenotype
involved_in cell migration
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
involved_in flight
inferred from mutant phenotype
inferred from mutant phenotype
involved_in locomotion
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:klar; FB:FBgn0001316
inferred from mutant phenotype
involved_in nuclear migration
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:klar; FB:FBgn0001316
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:klar; FB:FBgn0001316
inferred from mutant phenotype
inferred from mutant phenotype
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
non-traceable author statement
involved_in nuclear migration
inferred from biological aspect of ancestor with PANTHER:PTN002934743
Cellular Component (9 terms)
Terms Based on Experimental Evidence (6 terms)
CV Term
Evidence
References
colocalizes_with actin filament
inferred from direct assay
located_in cytoplasm
inferred from direct assay
located_in nuclear envelope
inferred from direct assay
inferred from direct assay
Terms Based on Predictions or Assertions (5 terms)
CV Term
Evidence
References
is_active_in cytoplasm
inferred from biological aspect of ancestor with PANTHER:PTN002934743
inferred from biological aspect of ancestor with PANTHER:PTN002934743
inferred from sequence or structural similarity with UniProtKB:Q8NF91
located_in membrane
inferred from electronic annotation with InterPro:IPR012315
located_in nuclear membrane
inferred from experiment
inferred from biological aspect of ancestor with PANTHER:PTN002934743
Gene Group (FlyBase)
Protein Family (UniProt)
Belongs to the nesprin family. (M9MRD1)
Summaries
Gene Snapshot
Muscle-specific protein 300 kDa (Msp300) encodes a Nesprin-like protein that is required for proper positioning of muscle nuclei, mitochondria, and neuromuscular junction. [Date last reviewed: 2019-03-14]
Gene Group (FlyBase)
KASH DOMAIN GENES -
The KASH domain consists of a C-terminal transmembrane domain followed by a 30 amino acid domain sequence. This domain targets the protein to the outer leaflet of the nuclear membrane by interacting with SUN domain proteins. KASH proteins are involved in mediating nuclear interactions such as with the cytoskeleton for localisation of the nucleus. (Adapted from FBrf0189793).
SPECTRINS -
Spectrins are key components of the membrane cytoskeleton, mediating actin filament bundling, crosslinking, and binding. They are characterized by spectrin repeats (SRs) and other conserved domains, including calponin homology, EF hand, and calcium-binding motifs. Spectrins are crucial for maintaining cellular structure in diverse tissues, including muscle and neurons. (Adapted from FBrf0262762.)
Protein Function (UniProtKB)
Component of the LINC (LInker of Nucleoskeleton and Cytoskeleton) complex involved in the connection between the nuclear lamina and the cytoskeleton (By similarity). Collaborates with klar to promote even spacing of the myonuclei at the periphery of striated muscle fibers by mediating a tight association between a nuclear ring structure of Msp300 and the plus ends of a unique astral MT network (PubMed:22927463). In addition, is essential for anchoring nuclei, mitochondria and endoplasmic reticulum (ER) structures to the Z-disks (PubMed:22927463). In fat body cells, part of perinuclear non-centrosomal microtubule-organizing centers (ncMTOCs) which function to accommodate the organization of microtubule (MT) networks to control nuclear positioning and dynein motor-based retrograde endosomal trafficking (PubMed:32066907). Functions as the primary organizer of the ncMTOC by recruiting Patronin, shot and msps to the organizing center (PubMed:32066907). Within the ncMTOC, Msp300 and shot anchors the ncMTOC at the nuclear surface and recruits the MT minus-end regulators Patronin and Nin for assembly, anchoring and/or stabilization of circumferential and radial MTs at the ncMTOCs (PubMed:32066907). Patronin, and perhaps Nin, recruits msps to the ncMTOC for the gamma-tubulin-independent elongation of radial MTs (PubMed:32066907).
(UniProt, M9MRD1)
Summary (Interactive Fly)

cytoskeletal protein - transports mRNAs from the nucleus to postsynaptic sites during synaptic maturation - controls glutamate receptor density at the neuromuscular junction - promotes myonuclear spacing

Gene Model and Products
Number of Transcripts
11
Number of Unique Polypeptides
11

Please see the JBrowse view of Dmel\Msp300 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry M9MRD1)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.45

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0303383
25760
8382
FBtr0303385
39327
12345
FBtr0303384
30030
9606
FBtr0303386
2610
407
FBtr0303387
43121
13540
FBtr0303388
37913
11986
FBtr0303389
36339
11999
FBtr0332403
24228
7962
FBtr0332404
36093
11917
FBtr0332405
39216
12308
FBtr0332406
20943
6685
Additional Transcript Data and Comments
Reported size (kB)

~13 (northern blot)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0292445
958.4
8382
5.16
FBpp0292447
1405.1
12345
4.86
FBpp0292446
1063.7
9606
4.22
FBpp0292449
1507.8
13540
4.28
FBpp0292450
1366.0
11986
4.84
FBpp0292451
1367.6
11999
4.85
FBpp0304676
905.8
7962
4.79
FBpp0304677
1358.4
11917
4.84
FBpp0304678
1401.1
12308
4.86
FBpp0304679
749.1
6685
4.52
Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments
Reported size (kDa)

300 (kD)

Comments
External Data
Subunit Structure (UniProtKB)

Core component of LINC complexes which are composed of inner nuclear membrane SUN domain-containing proteins coupled to outer nuclear membrane KASH domain-containing nesprins (By similarity). Interacts with klar; this interaction allows the anchoring of the Msp300 nuclear ring structure to the nuclear envelope (PubMed:22927463). Interacts with sls; this interaction mediates the recruitment of Msp300 to the Z-disks (PubMed:22927463).

(UniProt, M9MRD1)
Domain

Msp300 and Klar KASH domains cooperate to mediate the connection between a nuclear ring structure of Msp300 and the plus ends of a unique astral microtubule (MT) network.

(UniProt, M9MRD1)
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Msp300 using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.45

Transcript Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
pcr
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

Msp300 transcripts are expressed throughout development except in pupae. They are most abundant in late embryos.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
No Assay Recorded
Stage
Tissue/Position (including subcellular localization)
Reference
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

In myotubes with developed sarcomeric architecture, the protein is localized mainly to the Z discs.

In third instar larvae, Msp300 is detected in the peripodial epithelium overlying the eye disc. In late pupal eye discs, perinuclear Msp300 is found in photoreceptor cells.

Msp300 protein is initially expressed in a small subset of muscle precursors in each segment at ventral, lateral, and dorsal locations and in visceral muscles. It is expressed by muscle precursors at muscle-ectoderm and muscle-muscle attachment sites. As development continues it becomes associated with the myofibrillar network. Migrating myotubes exhibit high Msp300 levels at their leading edge.

Marker for
Subcellular Localization
CV Term
Evidence
References
colocalizes_with actin filament
inferred from direct assay
located_in cytoplasm
inferred from direct assay
located_in nuclear envelope
inferred from direct assay
inferred from direct assay
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Msp300 in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 40 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 22 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Msp300
Transgenic constructs containing regulatory region of Msp300
Aberrations (Deficiencies and Duplications) ( 23 )
Inferred from experimentation ( 23 )
Inferred from location ( 4 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
egg chamber & actin filament | maternal effect | germ-line clone
follicle cell & nucleus | somatic clone
nurse cell & cytoplasm | maternal effect | germ-line clone
nurse cell & nucleus | maternal effect | germ-line clone
oocyte & nucleus | maternal effect | germ-line clone
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (26)
6 of 14
Yes
Yes
5 of 14
No
Yes
3 of 14
No
Yes
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1  
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1  
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (29)
3 of 14
Yes
Yes
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
Yes
1 of 14
No
Yes
1 of 14
No
Yes
Mus musculus (laboratory mouse) (27)
6 of 14
Yes
Yes
5 of 14
No
Yes
3 of 14
No
Yes
2 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
3  
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
Xenopus tropicalis (Western clawed frog) (13)
5 of 13
Yes
Yes
3 of 13
No
Yes
2 of 13
No
Yes
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
Danio rerio (Zebrafish) (24)
10 of 14
Yes
Yes
9 of 14
No
Yes
8 of 14
No
Yes
4 of 14
No
Yes
3 of 14
No
Yes
2 of 14
No
Yes
2 of 14
No
Yes
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Caenorhabditis elegans (Nematode, roundworm) (5)
5 of 14
Yes
Yes
2 of 14
No
No
2 of 14
No
Yes
1 of 14
No
No
1 of 14
No
Yes
Anopheles gambiae (African malaria mosquito) (4)
9 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (0)
Saccharomyces cerevisiae (Brewer's yeast) (0)
Schizosaccharomyces pombe (Fission yeast) (0)
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:Msp300. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Drosophila melanogaster (Fruit fly) (4)
2 of 13
1 of 13
1 of 13
1 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 4 )
Potential Models Based on Orthology ( 4 )
Modifiers Based on Experimental Evidence ( 2 )
Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
Functional Complementation Data
Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
Interactions
Summary of Physical Interactions
Summary of Genetic Interactions
Interaction Browsers

Please look at the allele data for full details of the genetic interactions
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
External Data
Subunit Structure (UniProtKB)
Core component of LINC complexes which are composed of inner nuclear membrane SUN domain-containing proteins coupled to outer nuclear membrane KASH domain-containing nesprins (By similarity). Interacts with klar; this interaction allows the anchoring of the Msp300 nuclear ring structure to the nuclear envelope (PubMed:22927463). Interacts with sls; this interaction mediates the recruitment of Msp300 to the Z-disks (PubMed:22927463).
(UniProt, M9MRD1 )
Linkouts
DroID - A comprehensive database of gene and protein interactions.
MIST (protein-protein) - An integrated Molecular Interaction Database
Pathways
Signaling Pathways (FlyBase)
Metabolic Pathways
FlyBase
External Links
External Data
Linkouts
Class of Gene
Genomic Location and Detailed Mapping Data
Chromosome (arm)
2L
Recombination map
2-15
Cytogenetic map
Sequence location
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
25C6-25C10
Left limit from in situ hybridisation (FBrf0067338) Right limit from in situ hybridisation (FBrf0067338)
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
25C9-25C9
(determined by in situ hybridisation)
25C6-25C10
(determined by in situ hybridisation)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Stocks and Reagents
Stocks (46)
Genomic Clones (42)
cDNA Clones (56)
 

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced
BDGP DGC clones
Other clones
    Drosophila Genomics Resource Center cDNA clones

    For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

    cDNA Clones, End Sequenced (ESTs)
    RNAi and Array Information
    Linkouts
    DRSC - Results frm RNAi screens
    Antibody Information
    Laboratory Generated Antibodies
    Commercially Available Antibodies
     
    Cell Line Information
    Publicly Available Cell Lines
     
      Other Stable Cell Lines
       
        Other Comments

        The complete loss of Msp-300 function does not lead to defects in nuclear positioning in egg chambers.

        The KASH domain isoforms of Msp-300 have no essential function for nuclear migration during eye development.

        KASH forms of Msp-300 function in egg-laying.

        KASH forms of Msp-300 are not required for viability, nor for oogenesis.

        The KASH forms of Msp-300 do not play a redundant role with KASH forms of klar in nuclear positioning in the eye or the ovary.

        Analysis of egg chambers produced from Msp-300 germ-line clones shows that Msp-300 has a role in actin-dependent nuclear anchorage during nurse cell to oocyte cytoplasmic transport.

        Annotations CG31649 and CG33549 merged as CG33715 in release 4.2 of the genome annotation.

        dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.

        snmRNA:128 is derived from the ORF of Msp-300. snmRNA:765 is derived from the ORF of Msp-300.

        New annotation (CG31649) in release 3 of the genome annotation. New annotation (CG31916) in release 3 of the genome annotation.

        Examination of mutant embryos and the function of Msp-300 during embryonic muscle development suggests a functional link between LanA and Msp-300 in the development of the embryonic somatic musculature. Msp-300 displays significant similarity to vertebrate Dystrophin.

        MSP-300 decorates actin filaments and is expressed by muscle precursors at muscle-ectoderm and muscle-muscle attachment sites. As development continues it becomes associated with the muscle myofibrillar network. Migrating myotubes exhibit high MSP-300 levels at their leading edge, but in myotubes with developed sarcomeric architecture the protein is localised mainly to the Z discs.

        Relationship to Other Genes
        Source for database merge of

        Source for merge of: Msp-300 CG18251 CG18252

        Source for merge of: nesprin BcDNA:GH18470

        Source for merge of: Msp-300 nesprin

        Source for merge of: CG14035 Msp-300

        Source for merge of: Msp-300 CG31916

        Source for merge of: nesprin BcDNA:AT10293

        Source for merge of: CG31916 BcDNA:LP10936

        Source for merge of: CG31916 BcDNA:GH02446

        Source for merge of: Msp-300 Bbbf1

        Additional comments

        Annotations CG14035 and CG33715 merged as CG42768 in release 5.28 of the genome annotation.

        Source for identity of nesprin CG31649 was sequence comparison ( date:021108 ).

        Isolation of the AF521598 cDNA suggests that "Msp-300" and "nesprin" may represent two parts of a single gene.

        Source for merge of nesprin BcDNA:AT10293 was shared cDNA (AT10293) ( date:030530 ).

        Source for merge of CG31916 BcDNA:LP10936 was a shared cDNA ( date:030728 ).

        Source for merge of CG31916 BcDNA:GH02446 was a shared cDNA ( date:030728 ).

        Source for merge of nesprin BcDNA:GH18470 was a shared cDNA ( date:030728 ).

        Nomenclature History
        Source for database identify of

        Source for identity of: nesprin CG31649

        Source for identity of: Msp300 Msp-300

        Nomenclature comments
        Etymology
        Synonyms and Secondary IDs (36)
        Reported As
        Symbol Synonym
        Bbbf1
        BcDNA:AT10293
        BcDNA:GH02446
        BcDNA:GH18470
        BcDNA:LP10936
        CG31916
        CG33549
        Spec25CD
        l(2)25Ch
        l(2)jf22
        Name Synonyms
        Box B-binding factor 1
        MUSCLE-SPECIFIC PROTEIN 300
        Muscle-specific protein 300
        Muscle-specific protein 300 kDa
        Muscle-specific protein, 300 kDa
        Muscle-specific protein-300
        lethal(2)25Ch
        repetitive ORF
        Secondary FlyBase IDs
        • FBgn0031685
        • FBgn0053715
        • FBgn0001926
        • FBgn0010070
        • FBgn0010270
        • FBgn0031686
        • FBgn0031687
        • FBgn0047188
        • FBgn0051649
        • FBgn0051916
        • FBgn0053549
        • FBgn0062498
        • FBgn0063615
        • FBgn0064983
        • FBgn0065020
        • FBgn0011271
        • FBgn0260952
        Datasets (0)
        Study focus (0)
        Experimental Role
        Project
        Project Type
        Title
        Study result (0)
        Result
        Result Type
        Title
        External Crossreferences and Linkouts ( 137 )
        Sequence Crossreferences
        NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
        GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
        UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
        UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
        UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
        Other crossreferences
        AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
        BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
        DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
        EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
        FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
        KEGG Genes - Molecular building blocks of life in the genomic space.
        MARRVEL_MODEL - MARRVEL (model organism gene)
        Linkouts
        Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
        DroID - A comprehensive database of gene and protein interactions.
        DRSC - Results frm RNAi screens
        Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
        Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
        Flygut - An atlas of the Drosophila adult midgut
        iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
        Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
        MIST (protein-protein) - An integrated Molecular Interaction Database
        References (219)