FB2026_03 , released September 17, 2026
Human Disease Model Report: Down syndrome, DSCAM-related
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General Information
Name
Down syndrome, DSCAM-related
FlyBase ID
FBhh0000346
Disease Ontology Term
Parent Disease
OMIM
Overview

Expression of the Down syndrome cell-adhesion molecule (DSCAM) is increased in the brains of patients with several neurological disorders, including Down syndrome and fragile X syndrome (FBhh0000123). DSCAM maps to 21q22.2-q22.3, within or near the originally defined Down syndrome critical region. There is a second similar gene in humans (DSCAML1) and four related genes in flies (Dscam1, Dscam4, Dscam2, Dscam3). Although Dmel\Dscam1 is the best studied, there are genetic reagents available for all four fly genes.

Dmel\Dscam1 is notable for undergoing extensive alternative splicing, theoretically producing over 30,000 protein isoforms; this extreme diversity of isoforms has been shown to be necessary for the process of neuronal self-avoidance during neural development. In contrast, the human DSCAM gene has only a few alternative isoforms.

Transgenic constructs of wild-type human Hsap\DSCAM have been introduced into flies. When expressed using a Dmel\Dscam1 promoter, the human gene partially rescues a Dscam1 loss-of-function phenotype (exhibiting a later stage of lethality); severe abnormalities of brain structure are still observed. Overexpression of Dscam1 results in gut neural abnormalities and reduced the efficiency of food clearance from the larval gut.

Extensive genetic and physical interaction data are available for Dmel\Dscam1; see below and in the gene report for Dscam1. In particular, the protein of Fmr1, the fly ortholog of the gene implicated in fragile X syndrome, has been found to bind to Dscam1 RNA.

[updated Jan. 2023 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: Down syndrome
Symptoms and phenotype

Down syndrome is characterized by a particular combination of phenotypic features that includes mental retardation and characteristic facial structure. Individuals with Down syndrome often have specific major congenital malformations such as those of the heart (30-40% in some studies) and of the gastrointestinal tract. 90% of Down syndrome patients have a significant hearing loss (Mazzoni et al., 1994; pubmed:7881226). A number of other diseases are observed at higher frequency among Down syndrome individuals, including leukemia (Robison, 1992; pubmed:1532221) and Alzheimer disease (Wisniewski et al., 1985; pubmed:3158266). [from MIM:190685; 2016.07.19]

Specific Disease Summary: Down syndrome, DSCAM-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics
Cellular phenotype and pathology
Molecular information

DSCAM encodes a cell adhesion molecule that plays a role in neuronal self-avoidance by promoting repulsion between specific neuronal processes of either the same cell or the same subtype of cells. (Gene Cards, DSCAM; 2016.07.25). See Garrett et al., 2012 (pubmed:22912601) for a recent review.

External links
Disease synonyms
Ortholog Information
Human gene(s) in FlyBase
Human gene (HGNC)
Comments on ortholog(s)

Many to many: 2 human to 4 Drosophila; the fly genes Dscam4, Dscam1, Dscam2, and Dscam3 are orthologous to DSCAM and DSCAML1 in human.

Other mammalian ortholog(s) used
D. melanogaster Gene Information (1)
Gene Groups / Pathways
Comments on ortholog(s)

High-scoring ortholog of human genes DSCAM and DSCAML1 (4 Drosophila to 2 human). Dmel\Dscam1 shares 29-30% identity and 46-47% similarity with the human genes.

Orthologs and Alignments from DRSC
DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
Other Genes Used: Viral, Bacterial, Synthetic (0)
    Summary of Physical Interactions (21 groups)
    RNA-protein
    Interacting group
    Assay
    References
    electrophoretic mobility shift assay, autoradiography, clip-seq, anti bait coimmunoprecipitation, quantitative reverse transcription pcr
    anti bait coimmunoprecipitation, primer specific pcr, full identification by DNA sequencing
    anti bait coimmunoprecipitation, nucleotide sequence identification
    anti bait coimmunoprecipitation, nucleotide sequence identification, electrophoretic mobility shift assay, autoradiography
    anti bait coimmunoprecipitation, nucleotide sequence identification
    pull down, anti tag western blot
    anti bait coimmunoprecipitation, nucleotide sequence identification
    protein-protein
    Interacting group
    Assay
    References
    bead aggregation assay, fluorescence microscopy, inferred by author, enzyme linked immunosorbent assay, x-ray crystallography, affinity technology, anti tag coimmunoprecipitation, anti tag western blot, cosedimentation, molecular weight
    anti tag coimmunoprecipitation, anti tag western blot
    anti tag coimmunoprecipitation, western blot, two hybrid, anti bait coimmunoprecipitation, pull down, edman degradation, peptide massfingerprinting, anti tag western blot, far western blotting, autoradiography
    anti tag coimmunoprecipitation, anti tag western blot, affinity technology, fluorescence microscopy, inferred by author
    anti tag coimmunoprecipitation, western blot
    anti bait coimmunoprecipitation, anti tag western blot
    anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, anti tag western blot, affinity technology, fluorescence microscopy
    enzymatic study, autoradiography
    anti tag coimmunoprecipitation, western blot, anti bait coimmunoprecipitation, anti tag western blot
    two hybrid, anti bait coimmunoprecipitation, anti tag western blot, anti tag coimmunoprecipitation, western blot
    anti tag coimmunoprecipitation, peptide massfingerprinting
    anti tag coimmunoprecipitation, peptide massfingerprinting
    anti bait coimmunoprecipitation, western blot, anti tag coimmunoprecipitation, peptide massfingerprinting, pull down
    Alleles Reported to Model Human Disease (Disease Ontology) (19 alleles)
    Models Based on Experimental Evidence ( 9 )
    Modifiers Based on Experimental Evidence ( 11 )
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 1 )
    Allele
    Disease
    Interaction
    References
    Models Based on Experimental Evidence ( 1 )
    Allele
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Alleles Representing Disease-Implicated Variants
    Genetic Tools, Stocks and Reagents
    Sources of Stocks
    Contact lab of origin for a reagent not available from a public stock center.
    Bloomington Stock Center Disease Page
    Related mammalian, viral, bacterial, or synthetic transgenes
    Allele
    Transgene
    Publicly Available Stocks
    Selected Drosophila transgenes
    Allele
    Transgene
    Publicly Available Stocks
    RNAi constructs available
    Allele
    Transgene
    Publicly Available Stocks
    Selected Drosophila classical alleles
    Allele
    Allele class
    Mutagen
    Publicly Available Stocks
    loss of function allele
    ethyl methanesulfonate
    loss of function allele
    ethyl methanesulfonate
    loss of function allele
    ethyl methanesulfonate
    amorphic allele - genetic evidence
    loss of function allele
    ethyl methanesulfonate
    Delta2-3 transposase
    loss of function allele
    ethyl methanesulfonate
    References (14)