FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Gene: Dmel\Gαq
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General Information
Symbol
Dmel\Gαq
Species
D. melanogaster
Name
G protein alpha subunit q
Annotation Symbol
CG17759
Feature Type
FlyBase ID
FBgn0004435
Gene Model Status
Stock Availability
Enzyme Name (EC)
Gene Summary
G protein α q subunit (Gαq) encodes an alpha subunit of a heterotrimeric G-protein that functions downstream of GPCR signaling. It contributes to neuronal development, olfaction, flight, learning and memory. [Date last reviewed: 2019-03-07] (FlyBase Gene Snapshot)
Also Known As

dgq, Gqα, Gq, Gα49B, Galpha49B

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
2-67
RefSeq locus
NT_033778 REGION:12612740..12623197
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (27 terms)
Molecular Function (6 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from physical interaction with FLYBASE:norpA; FB:FBgn0262738
inferred from genetic interaction with FLYBASE:rdgB; FB:FBgn0003218
inferred from genetic interaction with FLYBASE:norpA; FB:FBgn0262738
Terms Based on Predictions or Assertions (4 terms)
CV Term
Evidence
References
inferred from biological aspect of ancestor with PANTHER:PTN000026392
inferred from electronic annotation with InterPro:IPR000654
inferred from biological aspect of ancestor with PANTHER:PTN000026392
inferred from electronic annotation with InterPro:IPR001019
inferred from electronic annotation with InterPro:IPR000654, InterPro:IPR001019
inferred from sequence or structural similarity with MGI:MGI:95776
inferred from biological aspect of ancestor with PANTHER:PTN000026392
inferred from electronic annotation with InterPro:IPR001019
Biological Process (16 terms)
Terms Based on Experimental Evidence (12 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from mutant phenotype
involved_in flight behavior
inferred from genetic interaction with FLYBASE:Itpr; FB:FBgn0010051
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:GluRIIC; FB:FBgn0046113
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:Itpr; FB:FBgn0010051
involved_in thermotaxis
inferred from mutant phenotype
inferred from direct assay
Terms Based on Predictions or Assertions (4 terms)
CV Term
Evidence
References
Cellular Component (5 terms)
Terms Based on Experimental Evidence (3 terms)
CV Term
Evidence
References
inferred from direct assay
located_in plasma membrane
inferred from high throughput direct assay
located_in rhabdomere
inferred from direct assay
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
is_active_in cytoplasm
inferred from biological aspect of ancestor with PANTHER:PTN000026392
inferred from sequence or structural similarity with MGI:MGI:95776
inferred from biological aspect of ancestor with PANTHER:PTN000026392
located_in rhabdomere
traceable author statement
Protein Family (UniProt)
Belongs to the G-alpha family. G(q) subfamily. (P23625)
Catalytic Activity (EC/Rhea)
GTPase activity
RHEA 19669: G protein activity
Summaries
Gene Snapshot
G protein α q subunit (Gαq) encodes an alpha subunit of a heterotrimeric G-protein that functions downstream of GPCR signaling. It contributes to neuronal development, olfaction, flight, learning and memory. [Date last reviewed: 2019-03-07]
Gene Group (FlyBase)
HETEROTRIMERIC G-PROTEIN ALPHA SUBUNITS -
The Heterotrimeric G-protein alpha subunits (Gα) can bind guanine nucleotide. When inactive, Gα is bound to GDP and associates with Gβγ forming an heterotrimer. Upon GTP binding, Gα dissociates from the heterotrimer Gαβγ. Gα has an intrinsic guanosine triphosphatase (GTPase) activity. (Adapted from FBrf0209904 and FBrf0183798).
Protein Function (UniProtKB)
Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. Could be the transducin analog, an amplifier and one of the transducers of a visual impulse that performs the coupling between opsin and cGMP-phosphodiesterase. Could mediate a subset of olfactory and gustatory responses.
(UniProt, P23625)
Summary (Interactive Fly)

splice variants play roles in phototransduction, retinal integrity and function in rhodopsin synthesis - regulation of wing growth - regulation of nociceptor sensitivity in larvae - DAMB signals via Gq to mediate forgetting in Drosophila - regulation of dendritic growth - regulation of sensitivity to ethanol - control of body fat storage - Regulates of dual oxidase activity in Drosophila gut immunity - modulation of axonal pathfinding

Gene Model and Products
Number of Transcripts
7
Number of Unique Polypeptides
3

Please see the JBrowse view of Dmel\Gαq for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry P23625)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
Comments on Gene Model

Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated

Stage-specific extension of 3' UTRs observed during embryogenesis (FBrf0215804); all variants may not be annotated.

5' UTR contains an ORF described as a putative conserved uORF (FBrf0204849); potential peptide 31aa in length.

Low-frequency RNA-Seq exon junction(s) not annotated.

Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.

Annotated transcripts do not represent all supported alternative splices within 5' UTR.

Gene model reviewed during 5.46

Gene model reviewed during 5.54

Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0087829
3050
353
FBtr0087831
3660
353
FBtr0087832
1615
353
FBtr0087833
3509
353
FBtr0087830
3017
353
FBtr0333101
1813
396
FBtr0304955
5648
353
Additional Transcript Data and Comments
Reported size (kB)

3.549 (longest cDNA)

1.8 (northern blot)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0086942
41.6
353
4.83
FBpp0086944
41.6
353
4.83
FBpp0086945
41.3
353
4.94
FBpp0086946
41.6
353
4.83
FBpp0086943
41.6
353
4.83
FBpp0305314
46.4
396
4.64
FBpp0293494
41.6
353
4.83
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

353 aa isoforms: Gαq-PA, Gαq-PC, Gαq-PE, Gαq-PG, Gαq-PK
Additional Polypeptide Data and Comments
Reported size (kDa)

317 (aa); 41.3, 37.2 (kD predicted)

Comments

Gβ76C protein, Gα49B protein, and Gγ30A protein are all expressed in the same pattern supporting the hypothesis that Gγ30A is part of a heterotrimeric eye-specific G protein.

External Data
Linkouts
Sequences Consistent with the Gene Model
Nucleotide / Polypeptide Records
 
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Gαq using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-1.03

Transcript Expression
expression microarray
Stage
Tissue/Position (including subcellular localization)
Reference
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
organism

Comment: maternally deposited

organism

Comment: extended 3' UTR isoform

northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
pcr
Stage
Tissue/Position (including subcellular localization)
Reference
RT-PCR
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

Zygotic-specific isoforms of Gαq with long 3' UTR extensions were observed.

RT-PCR analysis shows that the isoforms -RA, -RB, -RC, -RE, -RG and -RH of G-iα65A are expressed in the adult head, third segment of the antenna and maxillary palps. The isoform Gα49B-RD is only detected in the adult head.

Eye-enriched transcripts determined by ratio of expression level in wild-type heads. versus expression level in so heads.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data

Gα49B protein is expressed in the neurons, neuronal processes and non-neuronal tissues of the third segment of the antenna. It co-localises with G-iα65A protein.

Gα49B protein is localized to the photoreceptor cells of the retina. It is also detected in the lamina and the medulla, presumably in axons of the photoreceptor cells that project to these optic ganglia.

In adult head sections, this Gα49B protein isoform localizes to the third antennal segment, the maxillary palps, the tip of the proboscis, and the lamina. A subset of the staining detected in the third antennal segment localizes to olfactory neurons.

Gα49B proteins are detected in all rhabdomeres of the eye, and in ocelli.

Marker for
 
Subcellular Localization
CV Term
Evidence
References
inferred from direct assay
located_in plasma membrane
inferred from high throughput direct assay
located_in rhabdomere
inferred from direct assay
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Gαq in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 1-3
  • Stages(s) 4-6
  • Stages(s) 9-10
  • Stages(s) 11-12
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 13 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 31 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Gαq
Transgenic constructs containing regulatory region of Gαq
Aberrations (Deficiencies and Duplications) ( 5 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (22)
11 of 14
Yes
Yes
10 of 14
No
Yes
1  
10 of 14
No
Yes
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
4  
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
1  
4 of 14
No
No
4 of 14
No
No
1  
4 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2  
1 of 14
No
No
1 of 14
No
No
1  
1 of 14
No
No
1  
1 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (16)
12 of 14
Yes
Yes
10 of 14
No
Yes
10 of 14
No
Yes
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
1 of 14
No
No
1 of 14
No
No
Mus musculus (laboratory mouse) (16)
12 of 14
Yes
Yes
10 of 14
No
Yes
10 of 14
No
Yes
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
2 of 14
No
No
1 of 14
No
No
Xenopus tropicalis (Western clawed frog) (18)
9 of 13
Yes
Yes
6 of 13
No
Yes
5 of 13
No
Yes
5 of 13
No
Yes
5 of 13
No
No
4 of 13
No
No
4 of 13
No
No
4 of 13
No
No
4 of 13
No
No
4 of 13
No
No
3 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
2 of 13
No
No
1 of 13
No
No
1 of 13
No
Yes
1 of 13
No
No
Danio rerio (Zebrafish) (28)
11 of 14
Yes
Yes
11 of 14
Yes
Yes
11 of 14
Yes
Yes
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
3 of 14
No
No
2 of 14
No
No
2 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
1 of 14
No
No
Caenorhabditis elegans (Nematode, roundworm) (26)
10 of 14
Yes
Yes
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
5 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
4 of 14
No
No
3 of 14
No
No
3 of 14
No
No
3 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
2 of 14
No
No
1 of 14
No
No
1 of 14
No
No
1 of 14
No
Yes
1 of 14
No
No
Anopheles gambiae (African malaria mosquito) (8)
10 of 12
Yes
Yes
2 of 12
No
No
Arabidopsis thaliana (thale-cress) (14)
9 of 13
Yes
No
3 of 13
No
No
3 of 13
No
No
3 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
Saccharomyces cerevisiae (Brewer's yeast) (8)
7 of 13
Yes
No
5 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
1 of 13
No
No
Schizosaccharomyces pombe (Fission yeast) (2)
7 of 12
Yes
No
7 of 12
Yes
No
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:Gαq. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Drosophila melanogaster (Fruit fly) (9)
9 of 13
9 of 13
9 of 13
8 of 13
7 of 13
5 of 13
4 of 13
1 of 13
1 of 13
Human Disease Associations
FlyBase Human Disease Model Reports
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 1 )
Allele
Disease
Evidence
References
Potential Models Based on Orthology ( 4 )
Modifiers Based on Experimental Evidence ( 0 )
Allele
Disease
Interaction
References
Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
Homo sapiens (Human)
Gene name
Score
OMIM
OMIM Phenotype
DO term
Complementation?
Transgene?
Functional Complementation Data
Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
Interactions
Summary of Physical Interactions
Summary of Genetic Interactions
Interaction Browsers

Please look at the allele data for full details of the genetic interactions
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
Starting gene(s)
Interaction type
Interacting gene(s)
Reference
External Data
Linkouts
BioGRID - A database of protein and genetic interactions.
DroID - A comprehensive database of gene and protein interactions.
MIST (genetic) - An integrated Molecular Interaction Database
MIST (protein-protein) - An integrated Molecular Interaction Database
Pathways
Signaling Pathways (FlyBase)
Metabolic Pathways
FlyBase
External Links
Reactome Metabolic Pathways - An open-source, open access, manually curated and peer-reviewed metabolic pathway database.
External Data
Class of Gene
Genomic Location and Detailed Mapping Data
Chromosome (arm)
2R
Recombination map
2-67
Cytogenetic map
Sequence location
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
49B8-49B9
Limits computationally determined from genome sequence between P{EP}AmphEP2175&P{lacW}spt4k05316 and P{PZ}ox1
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
49B-49B
(determined by in situ hybridisation)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Stocks and Reagents
Stocks (30)
Genomic Clones (19)
cDNA Clones (227)
 

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced
BDGP DGC clones
Other clones
Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

cDNA Clones, End Sequenced (ESTs)
RNAi and Array Information
Linkouts
DRSC - Results frm RNAi screens
Antibody Information
Laboratory Generated Antibodies
Commercially Available Antibodies
 
Cell Line Information
Publicly Available Cell Lines
 
    Other Stable Cell Lines
     
      Other Comments

      Galpha49B signaling mediates odor identity discrimination in naive flies.

      Excess of Gβ76C over Gα49B prevents dark, spontaneous activity of photoreceptors.

      Gα49B is necessary for light-dependent architectural changes in the eye.

      dsRNA made from templates generated with primers against this gene tested in a cl-8 cell reporter assay to examine any role of Gα49B in the hh signalling pathway.

      Alternative splicing of Gα49B RNA and the distribution of the various isoforms has been analysed.

      Gα49B is essential for photoreceptor cell function, and functions as a molecular switch, reporting activity upstream in the signalling pathway.

      Gα49B mediates the stimulation by light-activated rhodopsin of the norpA-encoded phospholipase C in the visual transduction cascade.

      Gα49B has been cloned and sequenced.

      A Gα49B cDNA has been cloned and sequenced.

      Relationship to Other Genes
      Source for database merge of
      Additional comments

      One or more of the processed transcripts for this gene contain(s) two non-overlapping open reading frames (ORFs). The non-overlapping ORFs are represented by Gαq and CG45086.

      Nomenclature History
      Source for database identify of

      Source for identity of: Gα49B CG17759

      Source for identity of: Gαq Gα49B

      Nomenclature comments

      Genes encoding Gα subunits that have been named for their molecular function/orthology have had their symbols and names standardized following the format used in FBrf0220456, which also reflects popular usage in the Drosophila literature.

      Etymology
      Synonyms and Secondary IDs (55)
      Reported As
      Symbol Synonym
      DGαq
      Dromel_CG17759_galpha49b_mORF
      G alpha 49B
      Galpha49b
      Gαq
      (Ahmad et al., 2025, Akai et al., 2025, Gujar and Wang, 2025, Berry et al., 2024, Hsu et al., 2024, Lockyer et al., 2024, Nolan et al., 2024, Yin et al., 2024, Davis, 2023, Khan et al., 2023, Križaj et al., 2023, Stevens et al., 2023, Sebastian et al., 2022, Bilder et al., 2021, Heier et al., 2021, Li et al., 2021, Liu et al., 2021, Morris and Jasper, 2021, Noyes et al., 2021, O'Connor et al., 2021, Soundarrajan et al., 2021, Yeates and Frank, 2021, Chvilicek et al., 2020, Gu et al., 2020, Karam et al., 2020, Raghuraman et al., 2020, Toprak et al., 2020, Voolstra and Huber, 2020, Aleyakpo et al., 2019, Cao et al., 2018, Herman et al., 2018, Hori et al., 2018, Kim et al., 2018, Himmelreich et al., 2017, Kamalesh et al., 2017, Bernardo-Garcia et al., 2016, Mishra et al., 2016, Wang et al., 2016, Yadav et al., 2016, Bennett et al., 2015, Brusich et al., 2015, El Chamy et al., 2015, Kim et al., 2015, Krishnan et al., 2015, Rister et al., 2015, Yamanaka et al., 2015, Buchon et al., 2013, Ferrandon, 2013, FlyBase Genome Annotators, 2013, Kuraishi et al., 2013, Rister et al., 2013, Vaqué et al., 2013, Chakrabarti et al., 2012, Deng et al., 2011, Elsaesser et al., 2010, Katanayeva et al., 2010, Voolstra et al., 2010, Buchon et al., 2009, Ha et al., 2009, Han et al., 2006, Hiramoto and Hiromi, 2006, Meyer et al., 2006, Banerjee and Hasan, 2005, Baumann, 2004, Hardie et al., 2004, Roman, 2004, Schillo et al., 2004, Hardie et al., 2003, Hardie et al., 2002, Suh et al., 2001, Agam et al., 2000, Cook et al., 2000, Chyb et al., 1999, Scott and Zuker, 1998, Scott et al., 1997)
      dGqalpha-3
      Name Synonyms
      G protein alpha subunit q
      G protein α q subunit
      G protein α49B
      G-protein alpha49B
      G-protein α subunit
      G-protein-αq
      small amplify and slow termination
      Secondary FlyBase IDs
      • FBgn0004178
      Datasets (0)
      Study focus (0)
      Experimental Role
      Project
      Project Type
      Title
      Study result (0)
      Result
      Result Type
      Title
      External Crossreferences and Linkouts ( 77 )
      Sequence Crossreferences
      NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
      GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
      GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
      UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
      Other crossreferences
      AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
      BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
      DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
      EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
      FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
      FlyMine - An integrated database for Drosophila genomics
      KEGG Genes - Molecular building blocks of life in the genomic space.
      MARRVEL_MODEL - MARRVEL (model organism gene)
      Linkouts
      BioGRID - A database of protein and genetic interactions.
      Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
      DroID - A comprehensive database of gene and protein interactions.
      DRSC - Results frm RNAi screens
      Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
      FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
      FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Flygut - An atlas of the Drosophila adult midgut
      FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.
      iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
      Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
      KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
      MIST (genetic) - An integrated Molecular Interaction Database
      MIST (protein-protein) - An integrated Molecular Interaction Database
      Reactome Metabolic Pathways - An open-source, open access, manually curated and peer-reviewed metabolic pathway database.
      References (313)