FB2026_03 , released September 17, 2026
Human Disease Model Report: cancer, epithelial, TNF-SCRIB-related
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General Information
Name
cancer, epithelial, TNF-SCRIB-related
FlyBase ID
FBhh0000926
Disease Ontology Term
Parent Disease
OMIM
Overview

This Drosophila model of epithelial cancer makes use of the fly polarity gene scrib and the fly tumor necrosis factor (TNF) family gene egr. Classical amorphic and hypomorphic mutations, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated for Dmel\scrib. RNAi-targeting constructs, alleles caused by insertional mutagenesis, and loss-of-function mutations resulting from imprecise excision of TE insertions have been generated for Dmel\egr.

Loss of apical-basal polarity is an early event in the development of epithelial cancers; genes of the Scribble polarity complex have been used extensively in Drosophila models of epithelial cancer (see FBhh0000586). The fly gene scrib is orthologous to two genes in human, SCRIB and LRRC1. Somatic scrib(-) clones induced in developing eye imaginal discs in larvae are observed to have abnormal morphology and show increased proliferation; however, a mechanism to eliminate such clones appears to come into play, since very little scrib(-) tissue is eventually observed in the adult eye. (See the human disease model report 'cancer, epithelial, SCRIB-related' FBhh0000587).

Tumor necrosis factor (TNF) proteins are transmembrane proteins that can be released from the cell membrane by extracellular proteolytic cleavage; they can act via both autocrine and paracrine signaling. This is a large gene family in human; in Drosophila there is a single TNF family gene, eiger (egr). Animals homozygous for the loss-of-function mutation of egr1 are viable and fertile, with minor feeding and immune response phenotypes. Using the scrib model, egr has been found to play a significant role in tumorigenesis in that system. In contrast to the result in wild-type egr animals, somatic scrib(-) clones induced in eye or wing imaginal discs of egr1 homozygous larvae grow aggressively and develop into tumors; the animals typically die in the pupal stage. Additional experiments suggest that egr signaling originates within the scrib(-) clones and acts in an autocrine fashion.

Comparable experiments using animals with RNAi-mediated knockdown of the Drosophila TNF receptor gene grnd give similar results: the elimination of scrib(-) tumors is not observed in animals with reduced levels of grnd.

Multiple physical and genetic interactions have been described for both Dmel\egr and Dmel\scrib; see below and in the respective gene reports.

[updated Nov. 2018 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: cancer, epithelial, TNF-SCRIB-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics
Cellular phenotype and pathology
Molecular information

The SCRIB gene encodes a scaffold protein involved in cell polarization processes; it is involved in tumor suppression pathways (Gene Cards, SCRIB; 2017.08.01).

The tumor necrosis factor (TNF) superfamily is a protein superfamily of type II transmembrane proteins containing TNF homology domain and forming trimers. Members of this superfamily can be released from the cell membrane by extracellular proteolytic cleavage. TNF proteins are expressed predominantly by immune cells and regulate diverse cell functions, including regulation of immune response and inflammation, but also proliferation, differentiation, apoptosis and embryogenesis. The superfamily contains 19 members that bind to 29 members of TNF receptor superfamily. [https://en.wikipedia.org/wiki/Tumor_necrosis_factor_superfamily] This protein family is also called the TNF ligand family.

TNF proteins can act via both autocrine and paracrine signaling (Caldwell et al., 2014; pubmed:25274725).

HGNC currently lists 18 genes in the Tumor Necrosis Factor Superfamily (https://www.genenames.org/data/genegroup/#!/group/781)

SCRIB encodes a cytoplasmic multi-modular scaffold protein targeted to epithelial adherens junctions and neuronal presynaptic compartments. SCRIB and its orthologs in vertebrates and invertebrates participate in the process of cell polarization (summary by Nola et al., 2008; pubmed:18716323). [from MIM:607733; 2018.11.16]

External links
Disease synonyms
Ortholog Information
Human gene(s) in FlyBase
    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (3)
      Gene Snapshot
      eiger (egr) encodes the TNF superfamily ligand that activates the intracellular JNK pathway through its receptor encoded by grnd or wgn. Its roles include cell death, tumor suppression, tumor promotion, growth regulation, host defense, pain sensitization, and nutrient response. [Date last reviewed: 2018-10-11]
      Gene Groups / Pathways
      Comments on ortholog(s)

      Sole TNF family gene in Drosophila (1 Drosophila to many human); Dmel\egr is most closely related to human EDA, TNFSF13, and TNFSF13B.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      scribble (scrib) encodes a scaffolding protein that is part of the conserved machinery regulating apicobasal polarity. It acts with the products of dlg1 and l(2)gl to distinguish the basolateral domain of epithelial cells and neuroblasts, via reciprocally antagonistic interactions with the aPKC/par-6 complex that impacts vesicle trafficking. The product of scrib also organizes synaptic architecture and is implicated in learning and memory. [Date last reviewed: 2019-03-14]
      Gene Groups / Pathways
      Comments on ortholog(s)

      Ortholog of human SCRIB and LRRC1 (1 Drosophila to 2 human); Dmel\scrib shares 33% identity and 45% similarity with the human SCRIB gene. The human LRRC1 gene encodes a much smaller protein, corresponding to the amino end of SCRIB and Dmel\scrib; it shares 57% identity and 73% similarity with Dmel\scrib within that extent.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      grindelwald (grnd) encodes a receptor of the TNF superfamily ligand encoded by egr, which activates the intracellular JNK pathway. It is involved in apoptosis and neoplastic growth. [Date last reviewed: 2019-09-19]
      Gene Groups / Pathways
      Comments on ortholog(s)

      None of the TNF receptor genes in human has been identified as orthologous to grnd.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (25 groups)
        protein-protein
        Interacting group
        Assay
        References
        static light scattering
        pull down, western blot
        anti tag coimmunoprecipitation, anti tag western blot, pull down, molecular weight estimation by staining, x-ray crystallography, static light scattering, isothermal titration calorimetry, predetermined participant, molecular sieving
        anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot, molecular sieving, molecular weight estimation by staining, isothermal titration calorimetry, predetermined participant, static light scattering
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, anti tag western blot
        proximity ligation assay, fluorescence microscopy
        proximity-dependent biotin identification, western blot, proximity ligation assay, fluorescence microscopy, colocalization, inferred by author, anti tag coimmunoprecipitation, anti bait coimmunoprecipitation
        proximity ligation assay, fluorescence microscopy
        anti bait coimmunoprecipitation, western blot, isothermal titration calorimetry, predetermined participant, x-ray crystallography
        anti tag coimmunoprecipitation, anti tag western blot
        pull down, western blot, anti tag coimmunoprecipitation
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot
        pull down, autoradiography
        anti tag coimmunoprecipitation, western blot
        pull down, autoradiography, two hybrid, anti tag coimmunoprecipitation, anti tag western blot
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, anti tag western blot, pull down, molecular weight estimation by staining, x-ray crystallography, static light scattering, isothermal titration calorimetry, predetermined participant, molecular sieving
        anti tag coimmunoprecipitation, anti tag western blot, pull down, molecular weight estimation by staining
        pull down, molecular weight estimation by staining
        Alleles Reported to Model Human Disease (Disease Ontology) (28 alleles)
        Models Based on Experimental Evidence ( 5 )
        Modifiers Based on Experimental Evidence ( 11 )
        Models Based on Experimental Evidence ( 10 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 11 )
        Allele
        Disease
        Interaction
        References
        model of  carcinoma
        is ameliorated by CtBPHMS00677
        is ameliorated by CtBPJF01291
        is ameliorated by pucUAS.cMa
        model of  cancer
        model of  cancer
        model of  carcinoma
        is ameliorated by licGD7546
        is ameliorated by licJF01433
        is ameliorated by panJF02306
        is ameliorated by wgGD5007
        is ameliorated by Toll-7GD14417
        is ameliorated by Toll-7HM05230
        model of  carcinoma
        is exacerbated by Toll-6GD35
        is exacerbated by kstGLC01654
        is exacerbated by sqhGL00663
        is exacerbated by zipGD1566
        is exacerbated by Rho172F
        is exacerbated by RokGD1522
        is exacerbated by Toll-6GD14438
        is exacerbated by DefSK3
        is exacerbated by egr3
        is exacerbated by bskDN.UAS.cUa
        is ameliorated by msnUAS.cSa
        is ameliorated by Diap1UAS.cHa
        is ameliorated by Ire1GD3071
        is ameliorated by Ire1f02170
        is ameliorated by Xbp1GD4745
        is exacerbated by bskDN.UAS
        model of  cancer
        is ameliorated by hepr75
        is ameliorated by ykiB5
        is ameliorated by egr1
        is ameliorated by Ilp21
        is exacerbated by Ilp2UAS.cBa
        is ameliorated by Ilp53
        is exacerbated by InRUAS.Exel
        is exacerbated by chico1
        model of  carcinoma
        is ameliorated by GlyatTH00482
        is ameliorated by Glyatc02982
        is ameliorated by Gadd45HMS01436
        is ameliorated by Gadd45KK104250
        is ameliorated by aptUAS.cEa
        is exacerbated by aptGD1367
        Models Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 5 )
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        amorphic allele - molecular evidence
        P-element activity
        Delta2-3 transposase
        amorphic allele - molecular evidence
        P-element activity
        amorphic allele - molecular evidence
        Delta2-3 transposase
        loss of function allele
        ethyl methanesulfonate
        loss of function allele
        ethyl methanesulfonate
        loss of function allele
        ethyl methanesulfonate
        References (25)