FB2026_01 , released March 12, 2026
FB2026_01 , released March 12, 2026
Human Disease Model Report: cancer, multiple, RAS-Vps-C complex-related
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General Information
Name
cancer, multiple, RAS-Vps-C complex-related
FlyBase ID
FBhh0000966
Disease Ontology Term
Parent Disease
OMIM
Overview

Using an activated mutation in the fly Ras85D gene in a screen for genes involved in tumor progression, the Drosophila Vps-C complex gene dor was identified. Descriptions of hereditary phenotypes of an allele of this gene are the first published observations of tumor-like melanotic masses in flies (in 1918!). Loss-of-function mutations of dor promote overgrowth and invasive phenotypes in clones of Ras85DV12 cells; impaired lysosomal degradation is observed. Dmel\dor is orthologous to the human gene VPS18. Additional components of the Drosophila Vps-C complex, car (orthologous to human VPS33A) and Vps16A (orthologous to human VPS16), have been tested; loss-of-function mutations of either of these genes in clones of Ras85DV12 cells also result in neoplastic phenotypes. Classical loss-of-function mutations, RNAi-targeting constructs, and alleles caused by insertional mutagenesis have been generated for the three fly genes (dor, car and Vps16A).

Genes of the Vps-C complex were initially identified in yeast. Four genes, Vps11, Vps16, Vps18, and Vps33 form the Vps-C core complex and are highly conserved across eukaryotes. This complex is essential for late endosome and lysosome assembly and for numerous endolysosomal trafficking pathways, including the terminal stages of autophagy. Human VPS33A is implicated in the disease mucopolysaccharidosis-plus syndrome (MIM:617303).

None of the genes encoding the proteins of the human Vps-C core complex has been introduced into flies.

Severe loss-of-function mutations in any of the three Drosophila genes identified in this work, dor, car and Vps16A, result in larval lethality. Assayed in larvae, somatic clones, or RNAi-targeted tissues, abnormalities of endosome and lysosome structure and impaired autophagy are observed. Milder mutations result in dark eye color phenotypes. Physical and genetic interactions have been described for each of the three genes; see below and in the respective gene reports.

The constitutively active Ras85D mutation, Ras85DV12, is analogous to oncogenic mutations found in human RAS proteins. Variant(s) implicated in human disease tested (as analogous mutation in fly gene): G12V in the fly Ras85D gene (corresponds to G12V in the human KRAS and HRAS genes). See also the human disease model reports 'cancer, multiple, RAS-related' (FBhh0000474).

[updated Jun. 2019 by FlyBase; FBrf0222196]

Disease Summary Information
Disease Summary: cancer, multiple, RAS-Vps-C complex-related
OMIM report
Human gene(s) implicated
Symptoms and phenotype
Genetics
Cellular phenotype and pathology
Molecular information

Genes of the Vps-C complex were initially identified in yeast; the most severe mutations resulted in cells cells lacking an identifiable vacuolar lysosome. Four genes, Vps11, Vps16, Vps18, and Vps33, form the Vps-C core complex and are highly conserved across eukaryotes. This complex is essential for late endosome and lysosome assembly and for numerous endolysosomal trafficking pathways, including the terminal stages of autophagy. (Nickerson et al., 2009; pubmed:19577915).

External links
Disease synonyms
Search term: endolysosomal trafficking
Search term: endosomal trafficking
Search term: metastatic phenotype(s)
Search term: neoplastic phenotypes
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one: 1 human to 1 Drosophila.

    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one: 1 human to 1 Drosophila.

    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    Many to many: 2 human to 2 Drosophila. Paralogous genes are VPS33B in human and Vps33B in Drosophila.

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (4)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human VPS18 (1 Drosophila to 1 human). Dmel\dor shares 35% identity and 52% similarity to the human gene.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      carnation (car) encodes a subunit of the conserved HOPS complex, which is required for pigment granule formation and membrane fusion events, such as fusions between endosomes or autophagosomes with lysosomes. car loss of function mutant flies exhibit altered eye color. [Date last reviewed: 2018-09-06]
      Molecular function (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human VPS33A (2 Drosophila to 2 human). Dmel\car shares 44% identity and 61% similarity to the human VPS33A gene; it shares 28% identity and 46% similarity to the human VPS33B gene. Human VPS33B is more closely related to Dmel\Vps33B.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      Vacuolar protein sorting 16A (Vps16A) encodes a subunit of a heterohexameric tethering complex known as homotypic fusion and protein sorting (HOPS). HOPS roles include promoting the fusion of late endosomes, autophagosomes, biosynthetic vesicles, and lysosomes, and the biogenesis of lysosome-related eye pigment granules. The product of Vps16A is also part of miniCORVET (class C core vacuole/endosome tethering), a tethering complex involved in endosome maturation in nephrocytes and blood cells. [Date last reviewed: 2019-03-28]
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human VPS16 (1 Drosophila to 1 human). Dmel\Vps16A shares 36% identity and 58% similarity with the human gene.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Gene Snapshot
      Ras oncogene at 85D (Ras85D) encodes a protein that acts downstream of several cell signals, most notably from Receptor Tyrosine Kinases, to regulate tissue growth and development. When abnormally activated it can direct developmental defects and tissue hyperplasia, mimicking aspects of human disease including Rasopathies and cancer, respectively. [Date last reviewed: 2019-03-14]
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human genes KRAS, HRAS, and NRAS (many to many; multiple paralogs and orthologs in both species). Dmel\Ras85D shares 78-86% identity and 86-92% similarity with KRAS, HRAS, and NRAS; for these three human genes, Ras85D is the highest-scoring ortholog in Drosophila.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (62 groups)
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, anti tag western blot, two hybrid
        two hybrid, anti tag coimmunoprecipitation, anti tag western blot
        anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, Identification by mass spectrometry, anti tag western blot
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot
        pull down, peptide massfingerprinting
        pull down, peptide massfingerprinting
        anti tag coimmunoprecipitation, western blot
        anti bait coimmunoprecipitation, anti tag western blot, anti tag coimmunoprecipitation, pull down, western blot
        pull down, western blot
        anti tag coimmunoprecipitation, peptide massfingerprinting, two hybrid, western blot
        anti bait coimmunoprecipitation, western blot, anti tag western blot
        anti bait coimmunoprecipitation, anti tag western blot
        pull down, western blot
        protein-protein
        Interacting group
        Assay
        References
        anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot
        pull down, peptide massfingerprinting
        pull down, peptide massfingerprinting
        anti bait coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, anti tag western blot, anti bait coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, western blot, peptide massfingerprinting
        anti bait coimmunoprecipitation, anti tag western blot, anti tag coimmunoprecipitation, western blot
        pull down, western blot
        protein-protein
        Interacting group
        Assay
        References
        anti bait coimmunoprecipitation, anti tag western blot, anti tag coimmunoprecipitation, western blot
        anti tag coimmunoprecipitation, anti tag western blot, Identification by mass spectrometry
        anti bait coimmunoprecipitation, western blot, anti tag western blot
        two hybrid, anti tag coimmunoprecipitation, western blot, anti bait coimmunoprecipitation
        anti tag coimmunoprecipitation, western blot
        pull down, peptide massfingerprinting, anti tag coimmunoprecipitation, western blot
        pull down, peptide massfingerprinting
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, western blot, peptide massfingerprinting
        protein-protein
        Interacting group
        Assay
        References
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        pull down, anti tag western blot
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        two hybrid, anti tag coimmunoprecipitation, autoradiography
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, anti tag western blot
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        gtpase assay, autoradiography
        anti tag coimmunoprecipitation, peptide massfingerprinting
        pull down, western blot, two hybrid
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, anti tag western blot, two hybrid, pull down
        pull down, anti tag western blot
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, peptide massfingerprinting
        anti tag coimmunoprecipitation, anti tag western blot
        pull down, covalent binding, western blot, anti tag coimmunoprecipitation, Identification by mass spectrometry
        Alleles Reported to Model Human Disease (Disease Ontology) (36 alleles)
        Models Based on Experimental Evidence ( 3 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 4 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 2 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 1 )
        Allele
        Disease
        Evidence
        References
        Modifiers Based on Experimental Evidence ( 0 )
        Allele
        Disease
        Interaction
        References
        Models Based on Experimental Evidence ( 17 )
        Allele
        Disease
        Evidence
        References
        model of  cancer
        Modifiers Based on Experimental Evidence ( 19 )
        Allele
        Disease
        Interaction
        References
        model of  cancer
        is exacerbated by ITPUAS.F
        model of  cancer
        is ameliorated by InRGL00139
        is ameliorated by InRJF01183
        is ameliorated by InRJF01482
        is ameliorated by NetBΔ
        is ameliorated by NetBKK103672
        is ameliorated by unc-5MI04273
        is ameliorated by TimpUAS.cPa
        is ameliorated by JraNIG.2275R
        is ameliorated by bskDN.UAS
        is ameliorated by bskHMS00777
        is exacerbated by hepAct.UAS
        is exacerbated by imdUAS.cGa
        ameliorates  cancer
        model of  kidney cancer
        is ameliorated by Pka-C1B3
        is ameliorated by mTorΔP
        model of  cancer
        is exacerbated by Ptp61FΔ
        is exacerbated by exe1
        is exacerbated by M6W186stop
        is ameliorated by Ptip3804
        is exacerbated by p53UAS.cUa
        is ameliorated by Ilp8MI00727
        is exacerbated by Clbn1Q
        exacerbates  carcinoma
        model of  carcinoma
        is exacerbated by NkapGD11807
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        spontaneous
        ethyl methanesulfonate
        ethyl methanesulfonate
        ethyl methanesulfonate
        ethyl methanesulfonate
        ethyl methanesulfonate
        loss of function allele
        P-element activity
        loss of function allele
        loss of function allele
        P-element activity
        amorphic allele - genetic evidence
        amorphic allele - molecular evidence
        P-element activity
        amorphic allele - molecular evidence
        P-element activity
        References (7)